Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01778 ATGGAGGACACAGCTGTTCTGGTACCTCCTTGGCTTGAACAACTTCTTCACACACCTTTCTTCAACGTGTGTCGGATTCACGCAGAGGCCGCTAGAAGCGAGTGTAATATGTTTTGCCTACATTGCAATGGCGAAGCCTTTTGCTTTTATTGCAGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGataaggcgatcttcttatcacgatgtagtgagggtttcagaaatccagaaagtgttggacataagtggagtgcagacatatgtaatcaacagtgctcgagttttgttcctgaatgtgaggcctcagccaaaatctggaaaaggagtagctcacatttgtgagatttgcggaaggagcctcttggacccatttcggttttgttCTTTGGGATGTAAGCTTGAAGGAATAAGGAAAAATGGGGATGCAAGCTTTGCTTTGGATGGTAGGAATGAAGAATTAACAATGGATACTTCAAGAGGATCAGTCTCATCAAGACAGCAAGAAGAAGAATTGCGTGAAGGTTCAACACAAGACATGTATCCAGCCACGCCTTCTCCATCTGCTTCAAATTCAAGGAGAAGAAAAGGCATACCTCATAGGGCACCTTTTGGCTCCTAA 627 0.2951 MEDTAVLVPPWLEQLLHTPFFNVCRIHAEAARSECNMFCLHCNGEAFCFYCSSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLEGIRKNGDASFALDGRNEELTMDTSRGSVSSRQQEEELREGSTQDMYPATPSPSASNSRRRKGIPHRAPFGS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01778 208 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 207 - -
Gma19g01778 208 Pfam PLATZ transcription factor 65 136 IPR006734 -
Gma19g01778 208 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 207 - -
Gma19g01778 208 MobiDBLite consensus disorder prediction 181 195 - -
Gma19g01778 208 MobiDBLite consensus disorder prediction 152 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01778 Gma-Chr19 47060928 47062555 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma19g01778 PLATZ 5.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01778 - - gmx:100803083 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01778 19 47060928 47062555 Gma03g01728 03 43405473 43407141 GST
Gma19g01778 19 47060928 47062555 Gma10g00578 10 6071475 6073452 PCT
Gma19g01778 19 47060928 47062555 Gma13g01271 13 27063216 27065073 PCT
Gma10g00578 10 6071475 6073452 Gma19g01778 19 47060928 47062555 PCT
Gma13g01271 13 27063216 27065073 Gma19g01778 19 47060928 47062555 PCT