Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01775 ATGGGATTCAACAGAACCCTCTTTTGGCTTTCTGTCTTTGTAATTTTTCTCTTTTCTATCATATTTGTTCTTTATACCACGCCACCTTCCCCCGCTGCCAACACCGCCATTAGTCCTCAAGATAGCTTCAGTTTCCAGATTGGTATATTTAGTAAGATTATAAAGCTTAGTGGCGCTGAACACTTTATGTCTCTGATAACAAGTATAGCTAGGAGGAGACATCATCACCGGAGGAGTCATAAGGAAAAATGTGACAGGTCCAAATGGGATTCCAAGCTTATTCAAGACTATAATGTGAGTCTTGTTCTCACGGTTGACTTAAAGGGCTGTGCTAACTTCAGTAGCGTGCAGAAAGCTGTTGATGCTGTTCCTGAATCTAGTTCTGATACCACCCTTATCATAATCGATTCTGGCACATACAGAGAGAAGGTAGTGGTGCAGGCCAACAAAACAAACTTGATAGTTCAAGGTCAAGGGTATCTGAATACAACCATAGAATGGAACGACACCGCAAATTCCACCGGCGGTACTTCCTATAGCTACTCCTTCGCCGTCTTTGCTTCTAAGTTCACTGCTTACAACATCAGCTTTAAGAACACGGCTCCTCCACCGTCACCAGGAGTTGTTGGGGCACAAGCAGTGGCACTGAGGGTAACCGGTGATCAAGCAGCTTTCTATGGTTGTGGGTTTTATGGTGCGCAGGACACACTCAATGATGATGGTGGGAGACATTATTTTAAAGAATGCTTCATCCAAGGATCCATTGATTTCATATTTGGAAATGCTAGATCACTTTATGAGGATTGTACCATAAACTGTGTAGCAAAAGAAGAGAAGGATGGGATTAGCGGGTCGATCACCGCTCAAGGGAGACAATCGATGAATGAGGAAAGTGGATTTTCCTTTGTGAATTGCAGCATTGTTGGGAGTGGGAGAGTGTGGCTTGGAAGAGCATGGGGAGCCTATGCCACTGTGGTATTCTCAAGAACATACATGTCTGATGTCGTAGCTCCTGATGGATGGAATGATTGGAGAGATCCCTCTAGAGACCAGAGTGTCTTCTTTGGGGAGTACCGTTGTCTTGGACCTGGAGCAAATTATACATCCAGAGTCCCTTATGCCAAGCAACTCAGGGATTACGAAGCAAACTCCTACACGAATATTTCGTACATTGATGGAACTGATTGGCTTCTTGATTATTTTCAAAACTATGTTAACCCTTCATATATCTAA 1233 0.4347 MGFNRTLFWLSVFVIFLFSIIFVLYTTPPSPAANTAISPQDSFSFQIGIFSKIIKLSGAEHFMSLITSIARRRHHHRRSHKEKCDRSKWDSKLIQDYNVSLVLTVDLKGCANFSSVQKAVDAVPESSSDTTLIIIDSGTYREKVVVQANKTNLIVQGQGYLNTTIEWNDTANSTGGTSYSYSFAVFASKFTAYNISFKNTAPPPSPGVVGAQAVALRVTGDQAAFYGCGFYGAQDTLNDDGGRHYFKECFIQGSIDFIFGNARSLYEDCTINCVAKEEKDGISGSITAQGRQSMNEESGFSFVNCSIVGSGRVWLGRAWGAYATVVFSRTYMSDVVAPDGWNDWRDPSRDQSVFFGEYRCLGPGANYTSRVPYAKQLRDYEANSYTNISYIDGTDWLLDYFQNYVNPSYI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01775 410 PANTHER PECTINESTERASE 14-RELATED 11 403 - -
Gma19g01775 410 Gene3D - 97 404 IPR012334 -
Gma19g01775 410 SUPERFAMILY Pectin lyase-like 100 397 IPR011050 -
Gma19g01775 410 Pfam Pectinesterase 104 393 IPR000070 GO:0030599|GO:0042545
Gma19g01775 410 ProSitePatterns Pectinesterase signature 2. 251 260 IPR033131 -
Gma19g01775 410 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01775 Gma-Chr19 47008235 47011442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01775 96 397 Carbohydrate Esterase AT1G05310 56.066 1.13e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01775 - - gmx:100802034 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01775 19 47008235 47011442 Gma10g00102 10 1009761 1013089 PCT
Gma10g00102 10 1009761 1013089 Gma19g01775 19 47008235 47011442 PCT