Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01757 ATGCCGATCAGAAACATCGCCGTCGGAAGGCCTGAAGAGGCGACTCACCCCGACACGTTGAAGGCGGCTTTGGCTGAGTTCATCTCAACCTTCATCTTCGTGTTCGCCGGCTCAGGCTCCGGCATCGCCTACAACAAGCTCACCGACAACGGCGCTGCCACCCCTGCCGGCCTCATCTCCGCCTCCATCGCCCATGCATTCGCCCTCTTCGTCGCCGTCTCCGTCGGCGCCAACATCTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGGCGCCTTCGTCGGCGGCAACATCACCTTCCTCCGCGGCATCGTCTACGTCATCGCCCAGCTCCTCGGCTCCATCGTCGCCTCCCTCCTCCTGGCCTTCGTCACCGCCTCCACTGTTCCAGCATTCGGACTCTCCGCTGGAGTTGGAGTTGGCAACGCCTTGGTGTTGGAGATCGTGATGACCTTCGGTCTGGTGTACACGGTCTACGCAACTGCCATTGACCCCAAGAAGGGTAATTTGGGAATTATTGCTCCCATCGCCATTGGTTTCATTGTCGGCGCTAACATTTTGTTGGGTGGGGCCTTCTCTGGAGCGGCCATGAACCCCGCTGTGACATTTGGGCCTGCTGTCGTGAGCTGGACCTGGACCAACCACTGGATCTACTGGGCCGGGCCTCTCATCGGTGGTGGAATCGCTGGCCTTGTTTACGAGGTTGTCTTTATCAGCCACACCCACGAGCAGCTTCCCACCACTGACTACTAG 753 0.6029 MPIRNIAVGRPEEATHPDTLKAALAEFISTFIFVFAGSGSGIAYNKLTDNGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITFLRGIVYVIAQLLGSIVASLLLAFVTASTVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAIDPKKGNLGIIAPIAIGFIVGANILLGGAFSGAAMNPAVTFGPAVVSWTWTNHWIYWAGPLIGGGIAGLVYEVVFISHTHEQLPTTDY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01757 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Gma19g01757 250 PANTHER AQUAPORIN TIP1-1 1 250 - -
Gma19g01757 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Gma19g01757 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Gma19g01757 250 SUPERFAMILY Aquaporin-like 12 246 IPR023271 -
Gma19g01757 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma19g01757 250 ProSitePatterns MIP family signature. 196 204 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01757 Gma-Chr19 46874554 46875400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01757 1 250 Major Intrinsic Protein MIP AT2G36830 82.470 3.81e-147 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01757 K09873 - gmx:100527509 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01757 19 46874554 46875400 Gma19g01757 19 46874554 46875400 ECH
Gma19g01757 19 46874554 46875400 Gma03g01707 03 43235372 43236691 GST
Gma19g01757 19 46874554 46875400 Gma13g01254 13 26856264 26858288 PCT
Gma13g01254 13 26856264 26858288 Gma19g01757 19 46874554 46875400 PCT