Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01727 ATGAAGTGTTTTCCATTCTCCTATGGAGAGAAGAAAGATGAACCGAAAGGCTTGCAGTTGCAGTCAACATCGGGTCGATCAGACAATTCCACATGTGTTGAGGCTGAGGTTAGAAGATCTGGTTCTGCATTAAATTCTCAGGATGTTTCAGACAATGGCAGCTCAGAATCTCTCAGGAGGAATGCGATTCCCAGTTTGTCCCAGAGACCCTGCAACCTCAGAGTGTTTACTGTATCTGAACTGAAATCAGCCACAAAGAATTTCAGTCGCTCTGTTATGATCGGAGAGGGTGGGTTTGGGTGTGTCTACCTGGGATTGATAAGAAGTGCGGAGGACCCCTCCAGAAGAACTGAAGTCGCAGTTAAACAACTTAGTAAAAGAGGAATGCAGGGCCATAGGGAATGGGTAACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGTTACTGTGCTGATGATGATGAGAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGATCAGAGACTCCTCTCCCATGGAGTAGGAGATTAAAAATAGCTCGAGATGCAGCTAGTGGGTTAACATACCTGCACGAGGAAATGGATTTCCAGATAATTTTCAGAgatttcaaatcttcaaatatcctattggatgaacagtggaatgctaagctatcagactttgggttagcaaggttgggaccatcagatggactgactcatgtctcAACAGCGGTTGTAGGAACAATGGGATATGCAGCTCCTGAATATGTTCAAACTGGACGTCTAACATCAAAGAATGATGTATGGAGCTACGGTGTCTTCCTTTATGAACTCATAACTGGTAGGCGCCCTTTAGATCGAAATCGCCCCAGGGGTGAGCAGAAGCTGTTGGAATGGATAAGGCCATACCTATCAGATGGGAAGAAATTTCAACTAATATTAGATCCAAGACTTGATAAGAAACAAGTCTTCAAGTCAGCCCAGAGACTTGCTACGATAGCTAACCGATGCTTGGTAAAAAATCCAAAGAATCGTCCAAAGATGAGTGAGGTATTGGAAATGGTGAATGGAATGGTAGAATCCATATCCAGTTCTAGTCCACAGTTGCCCCTGAGGAGTGTGGCAACATTGGAAGCTTCCCAGGATACTGAAACAAACAACAAGAAACGAACCATGGATCATAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGTTGA 1287 0.404 MKCFPFSYGEKKDEPKGLQLQSTSGRSDNSTCVEAEVRRSGSALNSQDVSDNGSSESLRRNAIPSLSQRPCNLRVFTVSELKSATKNFSRSVMIGEGGFGCVYLGLIRSAEDPSRRTEVAVKQLSKRGMQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRSETPLPWSRRLKIARDAASGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPRGEQKLLEWIRPYLSDGKKFQLILDPRLDKKQVFKSAQRLATIANRCLVKNPKNRPKMSEVLEMVNGMVESISSSSPQLPLRSVATLEASQDTETNNKKRTMDHKPGESNWFVRMWRPKLVRTC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01727 428 Gene3D Phosphorylase Kinase; domain 1 69 173 - -
Gma19g01727 428 MobiDBLite consensus disorder prediction 18 61 - -
Gma19g01727 428 MobiDBLite consensus disorder prediction 1 17 - -
Gma19g01727 428 SUPERFAMILY Protein kinase-like (PK-like) 65 369 IPR011009 -
Gma19g01727 428 Pfam Protein tyrosine and serine/threonine kinase 93 367 IPR001245 GO:0004672|GO:0006468
Gma19g01727 428 CDD STKc_IRAK 94 372 - -
Gma19g01727 428 PANTHER OS01G0588500 PROTEIN-RELATED 7 423 - -
Gma19g01727 428 Gene3D Transferase(Phosphotransferase) domain 1 174 385 - -
Gma19g01727 428 ProSitePatterns Protein kinases ATP-binding region signature. 94 122 IPR017441 GO:0005524
Gma19g01727 428 PANTHER KINASE 1B 7 423 - -
Gma19g01727 428 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01727 428 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01727 Gma-Chr19 46576215 46580568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01727 1 384 Glycoside Hydrolase AT3G07070 40.561 2.44e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma19g01727 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01727 - - gmx:100813060 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01727 19 46576215 46580568 Gma19g01727 19 46576215 46580568 ECH
Gma19g01727 19 46576215 46580568 Gma03g01679 03 42911232 42914300 GST
Gma19g01727 19 46576215 46580568 Gma10g00523 10 5327969 5330889 PCT
Gma19g01727 19 46576215 46580568 Gma13g01235 13 26632699 26636753 PCT