Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01721 ATGGAAGCAACTAATGGCCACCAAAATGGTTCGTTTTGCTTGTCCAGTACTAAGGGAAGTGATCCGTTAAACTGGGGAGCGGCGGCGGAGGCGATGAAGGGGAGCCACCTGGACGAGGTGAAGCGCATGGTGTCCGAGTACCGGAAGCCGGTGGTCCGGCTCGGCGGCGAGACGCTCACCATCGCCCAGGTGGCCGCCGTGGCTGGACACGACCACGGCGTGACGGTGGAGCTCTCGGAGTCTGCCCGAGAAGGAGTGAAGGCGAGCAGTGAGTGGGTGATGAACAGCATGAACAACGGAACTGACAGTTACGGCGTCACCACCGGCTTCGGTGCCACGTCACACCGCCGAACCAAACAAGGTGGTGCTCTGCAGAAAGAACTCATCAGGTTTTTAAACGCAGGAATATTTGGAAATGGAACCGAATCAAGCCACACCCTGCCACACACTGCAACCAGAGCAGCCATGTTAGTGAGGATCAACACTCTTCTTCAAGGGTACTCAGGCATTAGATTTGAAATCCTAGAAGCCATCACCAAGCTCCTCAACAACAATGTTACCCCATGTTTGCCACTTCGTGGTACAATCACAGCTTCTGGAGATCTTGTTCCACTTTCTTACATTGCTGGTTTGCTAACTGGCAGACCCAACTCCAAAGCTGTTGGACCTAATGGAGAAGTACTTAACGCTAAGGAAGCTTTTGAATTGGCTAGCATCAATTCTGAGTTCTTTGAATTGCAACCCAAGGAAGGCCTTGCCCTTGTTAATGGCACTGCTGTTGGTTCTGGATTAGCTTCTATGGTTCTCTTTGAGGCTAATATACTAGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCGGAAGTGATGCAAGGGAAACCTGAATTTACTGACCATTTGACACACAAGTTAAAGCACCATCCTGGTCAAATTGAGGCTGCTGCAATTATGGAGCATATTTTGGATGGAAGTTCCTACATGAAAGCTGCTAAGAAGTTGCATGAGATTGATCCATTGCAAAAGCCAAAACAAGATCGATATGCCCTTAGAACTTCACCACAATGGCTTGGTCCTCTCATTGAAGTGATTCGTTTCTCGACTAAGTCAATTGAGAGAGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTCTCAAGGAACAAGGCATTACATGGTGGCAATTTCCAAGGAACCCCAATTGGAGTCTCTATGGACAACACGCGTCTGGCTCTTGCATCTATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCAAATCTCACTGCTAGCAGAAATCCTAGCTTGGACTATGGGTTCAAGGGAGCTGAAATTGCCATGGCTTCTTACTGCTCTGAACTCCAATATCTTGCAAATCCAGTAACTAGCCATGTCCAAAGTGCTGAGCAGCATAACCAGGATGTGAACTCTTTGGGTTTAATTTCATCCAGAAAGACAAATGAAGCTATCGAGATCCTTAAGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCGATTGACTTGAGGCATTTGGAGGAGAATTTGAAAAACTCGGTCAAGAACACTGTGAGCCAAGTTTCCAAAAGGATTCTTACCACAGGTGTCAATGGAGAACTCCATCCTTCAAGATTTTGTGAAAAGGATCTGCTAAAAGTGGTTGATAGGGAGTACGTATTTTCCTACATTGATGACCCCTGCAGTGCTACATACCCATTGATGCAAAAACTTAGGCAAGTGCTTGTAGATCATGCCTTGGTAAATGCAGAGAATGAGAAGGATATGAACACATCCATCTTTCAAAAGATAGCAAACTTTGAGGAGGAGTTGAAGAATTTCTTGCCAAAAGAGGTTGAAAGTGCAAGGGTTGCTTATGAGAGTGGCAAAGCTGCAATTCCGAACAAGATCCAAGAATGCAGATCTTACCCACTGTACAAGTTTGTGAGAGAGGAATTAGGGACTGGGTTGCTAACTGGAGAGAAGGTCAGGTCACCAGGTGAAGAGTTTGACAAATTATTCACAGCAATGTGCCAGGGCAAAATTATTGATCCTCTTCTGGAGTGCCTTGGGGAGTGGAATGGAGCTCCTCTTCCAATCTGTTGA 2139 0.4605 MEATNGHQNGSFCLSSTKGSDPLNWGAAAEAMKGSHLDEVKRMVSEYRKPVVRLGGETLTIAQVAAVAGHDHGVTVELSESAREGVKASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYVFSYIDDPCSATYPLMQKLRQVLVDHALVNAENEKDMNTSIFQKIANFEEELKNFLPKEVESARVAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLLECLGEWNGAPLPIC 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01721 712 Gene3D Fumarase/aspartase (Central domain) 259 707 - -
Gma19g01721 712 Pfam Aromatic amino acid lyase 59 535 IPR001106 -
Gma19g01721 712 SUPERFAMILY L-aspartase-like 21 712 IPR008948 GO:0003824
Gma19g01721 712 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 712 - -
Gma19g01721 712 CDD PAL-HAL 57 522 IPR001106 -
Gma19g01721 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Gma19g01721 712 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 21 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gma19g01721 712 Gene3D - 13 258 IPR024083 -
Gma19g01721 712 Gene3D - 525 646 IPR023144 -
Gma19g01721 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01721 Gma-Chr19 46527255 46531217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01721 21 712 Monolignol Biosynthesis Gene Families AT2G37040 84.682 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01721 K10775 - gmx:100811101 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01721 19 46527255 46531217 Gma20g01696 20 44152043 44158063 ECH
Gma19g01721 19 46527255 46531217 Gma03g01672 03 42833250 42836336 ECH
Gma19g01721 19 46527255 46531217 Gma19g01721 19 46527255 46531217 ECH
Gma19g01721 19 46527255 46531217 Gma03g01673 03 42844985 42848878 GST
Gma19g01721 19 46527255 46531217 Gma10g00529 10 5397352 5401828 PCT
Gma19g01721 19 46527255 46531217 Gma13g01241 13 26689587 26694407 PCT