Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01704 ATGGACAAAGATGCTAATTCAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAGGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGGGAGGATGAGTGGTATTTCTTTACTCCTAGAGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAAGCTACTGGGACTGACAAACCCATTTTCACTTCCTGTGGGATGAAGAGCATTGCTGTGAAGAAGGCACTCGTGTTCTACAAGGGTCGTCCACCAAAGGGATCGAAAACCGACTGGATCATGCATGAGTATAGATTGCATGATTCCACGATCTCCAATTCAAAGCAAGGAGGGACCATGAGACTGGATGAGTGGGTGCTGTGCCGGGTTCGACAAAAGACTATCAGCCCAAGAAGCCTTTGGGAAGACTCAAATGAACCCATTTATGAACCAACAAGCTACTTTCAACAAATGAGCGAGAAATCAAATCCTGAACCAGTCAAAAACTCTCTGCATAGTGAATATCCAATGTTGCCTTATATTCTGGCTTCTAAGAGTGCTCTGCCTAATTCTATTGACATGGCCTCAAGCTCGAGCTTTGGCTGTAATGATGATGTGAAAGCATATGCTTCATTGCATGATGGCAACTTAAATAATATAATAATAGGAGCACAGTTCATAGCACCTGTAGCTGAGGACTTGTTTAATCCTCTGAAGAGAAGAAACATTGAAGAGAACGAGTTGGACTTGTATGCTCCCCTCAATAAAAAACTAAACGAAGAAGTTGATGTTGGGAAGCAAATACTTGAGAAAGATGTCAACAAAGGCTACAATTTCAATAACTTTGACCAGTGGACTTCCATCATACAACCCCAAGAGTTTAATAGCTTGGCCTTTACGAAATATGCATGA 1008 0.4206 MDKDANSEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIFTSCGMKSIAVKKALVFYKGRPPKGSKTDWIMHEYRLHDSTISNSKQGGTMRLDEWVLCRVRQKTISPRSLWEDSNEPIYEPTSYFQQMSEKSNPEPVKNSLHSEYPMLPYILASKSALPNSIDMASSSSFGCNDDVKAYASLHDGNLNNIIIGAQFIAPVAEDLFNPLKRRNIEENELDLYAPLNKKLNEEVDVGKQILEKDVNKGYNFNNFDQWTSIIQPQEFNSLAFTKYA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01704 335 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Gma19g01704 335 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Gma19g01704 335 PANTHER NAC TRANSCRIPTION FACTOR 56 2 297 - -
Gma19g01704 335 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Gma19g01704 335 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 297 - -
Gma19g01704 335 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01704 Gma-Chr19 46309239 46310919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01704 4 165 NAC Transcription Factor Family AT1G69490 69.136 4.13e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma19g01704 NAM 4.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01704 - - gmx:100788799 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01704 19 46309239 46310919 Gma19g01704 19 46309239 46310919 ECH
Gma19g01704 19 46309239 46310919 Gma03g01657 03 42656715 42657798 GST