Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01691 ATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGCCCTGACTCGAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTTGAGACTTCAGTCTCATACTCAGAAGCTGATAAAGCACCACCACCACCACCTCCTATTCCTCCACCAGAAGAGATTAAATTAACTGATATTGAACATGAAATCAGTCATGATCACGATCAAGTTGTTGAAGTTGCAACTGCCATGGATGCTGAGGAACTTGTTCCTTCTGTTCAAATAGAACCTGTTAGGGTTGAAGCTGCCCTAATTGCTCATTTTGCCGGTAAACCAAAGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTGATGGAAGGGCCGGTTGTTAAACGCCAAGCCACAAGTACCCTCCGCTCTATGCAGACATTATCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAGGCAGCTCTTACAGAAACATGCTAGAGAGCTTGAGAGCTTGCGGATGGGAGAAGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCACTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCGTCTAGATCTGTAAATCCAATGTTTATGGATCCAACTAATCCGAGCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGACCTTGGGAGAGCCGTAGCCATATGGATAAAGAGTTGAATGACCACTCCTCCATAAGAAGCTCAAGCCGCAGCATTACCGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTCGGAAAAGCACTCTCCAACAGCCAGCCAGAATCCTGGCTCCCCTAGCTTTCAGTCCACTCCTTCCAAGCCAGCTTCATCATCTGCTAAGAAACCAAAGAAGGTAAGTCCAAGCCCAAGGGGCAGCTGGGTTATGGACGAGGACTCCAAAAGCTTGGTCAGTGTACACTCTGACCGGTTCCGGAGGCACTCCATTGCCGGTTCATCGGTGAGAGATGACGAGAGCCTTGCTAGCTCTCCAGCAGTTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCTCAGAAAATGCAAAAGCAGAGAAAGGTTCCTTTGGGAGTGCAAAGAAGCGGCTTTCTTTCCCAGCTTCACCTGCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTTGAAAGCAGCAGCTTAAATGCAGAGTTAGCTGTGGACAAGGGTGTGGACAGTTGA 1434 0.4728 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKFETSVSYSEADKAPPPPPPIPPPEEIKLTDIEHEISHDHDQVVEVATAMDAEELVPSVQIEPVRVEAALIAHFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNWKNSSRSVNPMFMDPTNPSWGWSWLERWMAARPWESRSHMDKELNDHSSIRSSSRSITGGEISKSFARFQLNSEKHSPTASQNPGSPSFQSTPSKPASSSAKKPKKVSPSPRGSWVMDEDSKSLVSVHSDRFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLASENAKAEKGSFGSAKKRLSFPASPARPRRHSGPPKVESSSLNAELAVDKGVDS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01691 477 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Gma19g01691 477 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Gma19g01691 477 MobiDBLite consensus disorder prediction 403 427 - -
Gma19g01691 477 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Gma19g01691 477 SMART iq_5 117 139 IPR000048 GO:0005515
Gma19g01691 477 MobiDBLite consensus disorder prediction 387 477 - -
Gma19g01691 477 Gene3D - 102 146 - -
Gma19g01691 477 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 472 - -
Gma19g01691 477 MobiDBLite consensus disorder prediction 322 354 - -
Gma19g01691 477 MobiDBLite consensus disorder prediction 322 370 - -
Gma19g01691 477 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01691 Gma-Chr19 46215767 46220300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01691 1 465 IQD Protein Family AT5G03040 54.507 8.34e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01691 - - gmx:100800080 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01691 19 46215767 46220300 Gma19g01691 19 46215767 46220300 ECH
Gma19g01691 19 46215767 46220300 Gma03g01643 03 42556360 42560577 GST
Gma19g01691 19 46215767 46220300 Gma10g00466 10 4541571 4545428 PCT
Gma19g01691 19 46215767 46220300 Gma13g01176 13 25950346 25953573 PCT
Gma10g00466 10 4541571 4545428 Gma19g01691 19 46215767 46220300 PCT
Gma13g01176 13 25950346 25953573 Gma19g01691 19 46215767 46220300 PCT