Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01687 ATGGATCCGTTCGTGTTAATGGATATACTTGGCACTTACTTTCCTCAGCAACTCTTCACCGTCGATGATATCTTGCTCAATCTCACTTCTGCTCTTCTTTCCTTCTTCTCTTCACCGCCGGGACAAAACCTCGTTTCTCAGGTGAAAAATGATTATGGCAACTACGTCTTGTCACTCGACTTTCTGCAGTTGCAACAAATATGTCATGTTGAGGAATTTTATAAAATGTTAACGGAGAAACCTAAAATTGCTCTCTTATGTATGAGTGCGGCTGTTCATAAGGTTTTGCTTTCCAAATGGGAGAATGGCGATCTAGAGCATGGTGCAAAGGTAGATATTCGTCTTCATAACTGTCCTGAAACTATGATTGCGCTGAAGAACTTAAAAGCAGCTTATATTGACAAGCTTGTCTCAGTTCGTGGTACTGCTGTGAAAGTCAGCACTGTCAGACCTCTGGTGGTGGAAATGAGTTTTGAATGCAGTAAATGTAAACAATCAATTACACGTATATTTCCTGATGGGAAATATTCTCCACCATCTACGTGCAATTTGAATGGCTGCAAGAGCAAATTCTTTAATCCGTTGCGATCTACTGCTCAAACTATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAGCCTGAAGACCATGAAGAAGGACGGGTGCCTCGAACAGTGGAATGCGAGCTTACCCAAGATCTCGTTGATGCGTGCATACCTGGAGATGTGGTGACTGTTACTGGAATTATAAGAGGAATTAACACTTACATGGATATTGGAGGAGGGAAGTCAAAGAACAAAAACCAAGGATTTTACTATTTGTACCTTGAAGCTGTATCCATAAAAAATTCAAAGTCACAGTCTGTACCTGAGGATCTGCCAGATTCTAACCCCAAAGCCAGACCAACTGAGCTGTTTGATTTGTTTTCGTTTTCTTCAAAGGATTTAGAATTTGTTGCGAAGTTTGCGCAGGAGCATGGTTCAGATTTATTTCGGCAAATCCTACAATCTATATGCCCGTCCATCTATGGGCATGAGCTTGTTAAAGCTGGGATAACTCTGGCATTATTTGGTGGTGTACGAAAGCATTCCATGGATCAGAATAAGGTTCCTGTCAGGGGAGATATTCATGTCATAATTGTTGGTGATCCTGGTCTAGGTAAGAGCCAGTTACTACAAGCAGCAGCAGCTGTTTCTCCACGTGGTATCTATGTCTGTGGTAATGCAACAACCAGAGCTGGCCTCACAGTAGCTGTAGTGAAGGATCCCATGACAAGTGACTATGCTTTTGAGGCAGGTGCTATGGTGCTGGCTGACAGTGGATTGTGCTGTATTGACGAGTTTGATAAAATGTCAACAGAGCATCAGGCTTTACTCGAGGCGATGGAGCAACAGTGTGTCTCTATTGCAAAGGCGGGATTAGTAGCAAGTTTATCATCCAGGACTTCTGTCTTAGCGGCTGCAAACCCCGCTGGTGGTCACTATAACCGAGCAAAAACTGTAAATGAAAATTTGAAAATGAGTGCTGCTCTCCTGTCTCGTTTCGATTTAATTTTCATACTGCTGGATAAACCCGATGAACTTCAGGACAAGCGACTCTCGGAGCACATTATGGCACTTCATGGTGGAAATGCACAACATTCACCGGTGTTGAAAAAGCGACGTGGAGATCCATCTGATTCCATAGCTGGTGTATCACAGAATGCCGAAGGTTTTGATCTGGGCGTTAGATCTGGGTCTTTAATTTCAAGTTTGAGACTTGACCCCCAAAGAGACTGTGACTTTGTTCCATTACCTGGTCAACTTCTTCGCAAATACATTGCTTATGCAAGGAGTTTTGTCTTTCCTAGGATGACAAAGCCAGCAGCAGAAATCTTGCAAAAGTTTTACCTAAAACTGAGAGATCATAATACTTCAGCTGACGGTACTCCTATCACAGCTAGGCAGCTGGAAAGTCTTGTAAGGCTAGCTGAAGCTCGGGCTCGGCTAGACTTGAGAGTAGAAATAACGACCCAGGATGCAACGGATGTTGTTGAAATCATGAAGGAATCCCTGTATGATAAATATGTTGATGAGCATGGTGTCGTGGATTTCGGTCGAAGTGGTGGGATGAGTCAACAGAAAGAGGCAAAACGCTTTCTAAATGCCCTAAACAAGCAATCGGAACTGGAACAGAAGGATTGCTTTTCAGTATCTGAAATATACAGTTTGGCGGATAGGATTTGTTTGAAAGTTCCTGATATTGACACTTTCATTGAAAATTTAAACAGTGTTGGTTATCTACTAAAAAAAGGACCAAAGACATACCAGGTTTTATCCTCTTCCTACGCACGAAGCCAACCGTTTAGGACAAGGGACTAA 2364 0.4222 MDPFVLMDILGTYFPQQLFTVDDILLNLTSALLSFFSSPPGQNLVSQVKNDYGNYVLSLDFLQLQQICHVEEFYKMLTEKPKIALLCMSAAVHKVLLSKWENGDLEHGAKVDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQSITRIFPDGKYSPPSTCNLNGCKSKFFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGKSKNKNQGFYYLYLEAVSIKNSKSQSVPEDLPDSNPKARPTELFDLFSFSSKDLEFVAKFAQEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTRAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSTEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPAGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELQDKRLSEHIMALHGGNAQHSPVLKKRRGDPSDSIAGVSQNAEGFDLGVRSGSLISSLRLDPQRDCDFVPLPGQLLRKYIAYARSFVFPRMTKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLRVEITTQDATDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRICLKVPDIDTFIENLNSVGYLLKKGPKTYQVLSSSYARSQPFRTRD 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01687 787 Gene3D - 125 254 IPR012340 -
Gma19g01687 787 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 8 781 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 692 IPR027417 -
Gma19g01687 787 Gene3D - 309 696 IPR027417 -
Gma19g01687 787 SMART mcm 121 687 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 Pfam MCM AAA-lid domain 603 686 IPR041562 -
Gma19g01687 787 Gene3D - 152 202 - -
Gma19g01687 787 PANTHER DNA HELICASE MCM8 8 781 - -
Gma19g01687 787 SMART AAA_5 375 527 IPR003593 -
Gma19g01687 787 Pfam MCM OB domain 125 253 IPR033762 -
Gma19g01687 787 SUPERFAMILY Nucleic acid-binding proteins 51 255 IPR012340 -
Gma19g01687 787 PRINTS Mini-chromosome maintenance (MCM) protein family signature 374 389 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 PRINTS Mini-chromosome maintenance (MCM) protein family signature 434 448 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 PRINTS Mini-chromosome maintenance (MCM) protein family signature 461 474 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 PRINTS Mini-chromosome maintenance (MCM) protein family signature 485 497 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 PRINTS Mini-chromosome maintenance (MCM) protein family signature 512 520 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 ProSiteProfiles MCM family domain profile. 331 538 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 Pfam MCM P-loop domain 328 542 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma19g01687 787 CDD MCM8 335 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01687 Gma-Chr19 46180042 46189201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01687 1 773 Core DNA Replication Machinery Family AT3G09660 71.871 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01687 K10737 - gmx:100784549 1541.94