Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01686 ATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGTAGCCACGAGAGCGGCGAGCACAGCCCTCGCTCTAACGTGCGCGAGCAGGACAGGTACCTCCCCATCGCTAACATAAGCCGCATCATGAAGAAGGCACTACCTGCGAACGGTAAAATCGCCAAGGACGCCAAAGAGACCGTTCAGGAATGCGTATCCGAGTTCATCAGTTTCATCACCAGCGAGGCCTCTGATAAGTGTCAGAGGGAAAAGAGAAAGACTATTAACGGTGATGATTTGCTCTGGGCCATGGCCACTCTTGGTTTTGAGGATTATATCGATCCTCTTAAAATTTACCTCACTAGATACAGAGAGATGGAGGGTGATACGAAGGGTTCAGCCAAGGGCGGAGACTCATCTTCTAAGAAAGATGTTCAGCCAAGTCCTAATGCTCAGCTTGCTCATCAAGGTTCTTTCTCACAAGGTGTTAGTTACACAATTTCTCAGGGTCAACATATGATGGTTCCAATGCAAGGCCCGGAGTAG 516 0.5078 MADGPASPGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSAKGGDSSSKKDVQPSPNAQLAHQGSFSQGVSYTISQGQHMMVPMQGPE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01686 171 MobiDBLite consensus disorder prediction 118 150 - -
Gma19g01686 171 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 157 - -
Gma19g01686 171 SUPERFAMILY Histone-fold 27 131 IPR009072 GO:0046982
Gma19g01686 171 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Gma19g01686 171 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Gma19g01686 171 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Gma19g01686 171 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Gma19g01686 171 MobiDBLite consensus disorder prediction 1 28 - -
Gma19g01686 171 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 157 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma19g01686 171 Gene3D Histone, subunit A 16 151 IPR009072 GO:0046982
Gma19g01686 171 MobiDBLite consensus disorder prediction 129 150 - -
Gma19g01686 171 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01686 Gma-Chr19 46173653 46178996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01686 1 169 CCAAT-HAP3 Transcription Factor Family AT2G37060 75.568 3.62e-87 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma19g01686 CBFD_NFYB_HMF 1.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01686 K08065 - gmx:100798667 309.301