Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01684 ATGTTGGATCTCAACCTCAACGCCGATTCCGCCTCCGACTTGCAAATGGAGAGCTCCGGCAGCTTCAATTCCTCCGTCGTCAATGCCGCCGACACCGACGACTCCTGCTCCTACGGCGACGCCGTTGCCTACAACTTTGCCATCCTCAACAACGCCGCCACCTCCGACGGGCTTCCCCTCGGCGCCGCCGGAGAACCGTCCGTTCGCACCATCCAGCTCTTTCCGGCGGCCGATTCGGGAGCCTCGGCGGCGGCGTGGCTTGATTTCTCGTCGAAGGTGGATCAGCACGGTGCTCCGCCGGAGCAGAGGATCACTCCCCGGCAACAGCAggtgaagaagagccgaagaggaccgcggtcgcgaagctcgcagtatcgcggcgttactttctatcgcagaaccggaagatgggaatcgcacatttggttagtacttaGTGGATTTGACACCGCGCATGTTGCGGCAAGGGCTTATGATCGAGCTGCGATCAAGTTCCGTGGCGTTGATGCGGATATCAATTTTAACGTTAGCGATTACGATGAAGATATAAAGCAGATGAGTAACTTCACGAAGGAGGAGTTTGTGCACATTTTGCGGCGACAGAGCACTGGTTTTTCGAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAGTGCGGGCGATGGGAAGCTCGTATGGGGCAGTTTCTTGGTAAAAAGTATATATATCTTGGGCTATTCGACAGTGAATTAGAGGCTGCAAGAGCGTATGATAAGGCAGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAACTTCGAGCCCAGCTTGTATGAAGGGGAGGTAATTTCCCAGTCTGATAATGAAGATACCAAGCAAAGTCTTGATCTGAACTTGGGCATAGCTCCCCCTTCTTACTCTGATGGTCAAATCAAGAACACACCCAGCAACGGGAGTGGTATGATAGCTCCGCAGAGCTGGGATGATATCCCTCTCGATAAGCGAGTTATGTTTGAGCACTCTGGATCAAGATCACGGACCATTCAGCCACCTCATCATGGCTTCTCCATAGCATCTGGGCAACATCCTTCCGTCTGGAATGGTAGCAATTTCTTTCCTATCTACGAGGAAACAGCAATAGAGAAGAGGATGGAAGCTGCTCCCGTGCCAAATTGGGCATGGCAAGTCCAAGGTCCTTATGGCAGGGCAACTCTTGCTCCACCCTTCTCTACTGCAGCATCATCAGGATTCCCTTCAACAATAATACCATCAGCTGCGGATACTCAAATTCGTTTTCCAAACATGACATTCCTCCACTCGCATTTTCCATCATCAATCACTAACTCCGGCACCATATCCCCTTTCTTCTTCGGTAGCTGA 1362 0.4743 MLDLNLNADSASDLQMESSGSFNSSVVNAADTDDSCSYGDAVAYNFAILNNAATSDGLPLGAAGEPSVRTIQLFPAADSGASAAAWLDFSSKVDQHGAPPEQRITPRQQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWLVLSGFDTAHVAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDKAAIKCNGREAVTNFEPSLYEGEVISQSDNEDTKQSLDLNLGIAPPSYSDGQIKNTPSNGSGMIAPQSWDDIPLDKRVMFEHSGSRSRTIQPPHHGFSIASGQHPSVWNGSNFFPIYEETAIEKRMEAAPVPNWAWQVQGPYGRATLAPPFSTAASSGFPSTIIPSAADTQIRFPNMTFLHSHFPSSITNSGTISPFFFGS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01684 453 ProSiteProfiles AP2/ERF domain profile. 211 268 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 SUPERFAMILY DNA-binding domain 123 177 IPR016177 GO:0003677
Gma19g01684 453 CDD AP2 210 270 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 445 - -
Gma19g01684 453 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 445 - -
Gma19g01684 453 SUPERFAMILY DNA-binding domain 210 269 IPR016177 GO:0003677
Gma19g01684 453 Pfam AP2 domain 210 260 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 Gene3D AP2/ERF domain 210 269 IPR036955 GO:0003700|GO:0006355
Gma19g01684 453 Gene3D AP2/ERF domain 123 177 IPR036955 GO:0003700|GO:0006355
Gma19g01684 453 SMART rav1_2 124 181 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 SMART rav1_2 211 274 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 ProSiteProfiles AP2/ERF domain profile. 124 175 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 MobiDBLite consensus disorder prediction 93 125 - -
Gma19g01684 453 CDD AP2 124 177 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 PRINTS Ethylene responsive element binding protein signature 250 270 IPR001471 GO:0003700|GO:0006355
Gma19g01684 453 PRINTS Ethylene responsive element binding protein signature 212 223 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01684 Gma-Chr19 46136401 46138743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01684 109 335 AP2-EREBP Transcription Factor Family AT4G36920 66.809 1.56e-87 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma19g01684 AP2 1.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01684 K09284 - gmx:100797238 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01684 19 46136401 46138743 Gma19g01684 19 46136401 46138743 ECH
Gma19g01684 19 46136401 46138743 Gma03g01637 03 42491308 42494411 GST