Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01682 ATGGCCATGAAGCCCTCAACTTCCACAAGTGGGTCTGGCAAGAAGATTAGAAAGCCTTATACTATTACCAAATCTAGGGAGAGCTGGTCTGAGGAAGAGCACGACAAGTTTCTCGAAGCTCTTCAACTatttgacagagattggaagaaaattgaagattttgttggttcaaaatcagttattcagattagaagtcatgcccagaagtacttcttgaaagttcaaaagagcgggacagtagcacatgtgcctcctcctcggcctaagcgcaaagcttctcatccttatccacaaaaggcatccaaaaatgttttgttgccaatgccagcttccatggtttatgtttcttccactagtacccttccaccagggtatgtcacatgggatgaaaattccttgctcatgaattctggatccaacaaatcagtgccttgtaaggatgagctcgccaatcttcttggaaatgaagctgatattggatcaaaggggataacacgaattgaccacagcagtcttagtggtgttgggaactctactagaaatctgcctgctactgagatgccaaaacaagggaaacaggctcaggttattcatgGTTTGCCAGATTTTGCTGATGTTTACAGCTTCATTGGAAGTGTTTTTGATCCAGACACAGAAGGCCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAAAAACCTCACTGTCAATTTGTCTAGTCCTGACTTTGAGCCCGTTAGGGAGGTCATGTCATCATACGATGTCCATACAAAAACAGTAGGAGTTACCGCAGGAATTGACGTCAAGAAGCAGACAAATGATCTATCATGTCAAACAGCTTGA 870 0.1943 MAMKPSTSTSGSGKKIRKPYTITKSRESWSEEEHDKFLEALQLFDRDWKKIEDFVGSKSVIQIRSHAQKYFLKVQKSGTVAHVPPPRPKRKASHPYPQKASKNVLLPMPASMVYVSSTSTLPPGYVTWDENSLLMNSGSNKSVPCKDELANLLGNEADIGSKGITRIDHSSLSGVGNSTRNLPATEMPKQGKQAQVIHGLPDFADVYSFIGSVFDPDTEGHVQKLKEMDPINFETVLLLMKNLTVNLSSPDFEPVREVMSSYDVHTKTVGVTAGIDVKKQTNDLSCQTA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01682 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Gma19g01682 289 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Gma19g01682 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 73 IPR006447 GO:0003677
Gma19g01682 289 MobiDBLite consensus disorder prediction 1 16 - -
Gma19g01682 289 SMART sant 25 73 IPR001005 -
Gma19g01682 289 ProSiteProfiles SANT domain profile. 24 75 IPR017884 -
Gma19g01682 289 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Gma19g01682 289 CDD SANT 28 71 IPR001005 -
Gma19g01682 289 Gene3D - 29 76 - -
Gma19g01682 289 MobiDBLite consensus disorder prediction 1 31 - -
Gma19g01682 289 PANTHER SWI/SNF COMPLEX-RELATED 3 283 - -
Gma19g01682 289 Pfam Myb-like DNA-binding domain 26 71 IPR001005 -
Gma19g01682 289 PANTHER PROTEIN REVEILLE 8 3 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01682 Gma-Chr19 46119271 46122790 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma19g01682 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01682 - - gmx:100783482 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01682 19 46119271 46122790 Gma03g01635 03 42471119 42474233 GST
Gma19g01682 19 46119271 46122790 Gma10g00455 10 4404718 4409379 PCT
Gma19g01682 19 46119271 46122790 Gma13g01162 13 25812162 25819078 PCT
Gma10g00455 10 4404718 4409379 Gma19g01682 19 46119271 46122790 PCT
Gma13g01162 13 25812162 25819078 Gma19g01682 19 46119271 46122790 PCT