Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01662 ATGTCTCGTCTAACACCATCACCAACCAACCCTGTCCACGAAGACAGGCTTCCTTTCTTCAACCAATCCATGGAACTAGTCCAACCCCCAACCCGAACCAGATCCAGAACCCTCGGCGACCTCCTTAAACGCGTCGAGGATGCTCAAAACGACACTCCTCTTGCACCACCCCACCATGTTCTCGATCTCTCCTCTTCCTCCGCCACCCACCCCTTTGTCCTCTCCTTCACCAACTTAACCTACAACGTCAACCTCCGCCGCAAGTTCACTTTTTTTCCCGCCACCACCGCTTCCGCGCCCGACCACGAAACCAAACCCAACGGCACCAAGACTCTCCTCAACGACATCTCCGGCGAGGCCAGGGACGGCGAGATCATGGCCGTTCTCGGCGCCAGCGGCTCCGGAAAGTCCACCTTAATCGACGCCCTCGCCGATAGAATCTCAAAAGAAAGCCTCAGAGGCACGGTGAAATTAAACGGCGACGTTCTGGAATCGAGTCTTTTGAAGGTTATATCCGCTTACGTCATGCAAGACGACCTCCTCTTTCCCATGCTCACCGTCGAAGAAACCCTAATGTTCGCCGCGGAGTTCAGACTCCCTCGCTCTTTCTCAAAGTCCAAGAAAAAGGCTCGTGTACAAGCCCTCATCGACCAGCTCGGCCTCCGCTCCGCCGCCTCCACCGTCATCGGCGACGAGGGCCACCGCGGAGTCTCCGGCGGCGAACGCCGCCGAGTCTCCATCGGCACCGACATCATCCACGACCCCATCGTGCTCTtcctcgacgaaccaacctccggcctcgactccaccagcgccttcatggtcgtcaaagtcttacagcgaatcgctcagagcggaagcatcgtcatcatgtccattcaccaacctagctacagaatcttgagcctcttagaccacttgatcttcctctcccacggaaacaccgtcttcagcggctctccggcgaaccttcccgccttcttctccgagttcggccaccccatcccggagaaCGAAAACCGAACCGAATTCGCACTCGACCTAATCCGCGAACTCGAACAAGAAGCTACTGGTACCAAGAGTTTAGTAGACTTCAACAAATCCTGGCAGCTGAAAAACAAAAACCAGGCCCAGGCCCAGAACGAGTATGATTCCAAACTATCTCTCAAGGACGCTATCAGCGCTAGCATTTCTAGAGGCAAACTCGTGTCCGGCACTAACGGTAACGGCAGGAACAACTCAACGGCACTGGTTTCAGTTCCCGCCTTCGCGAATTCGTTTTGGATGGAGATGTTGGTGATAGGAAAACGGTCGCTAACTAACTCAAGGAGGATGCCGGAGTTATTCGGGATTCGTTTGGGTGCAGTTCTGGTCACGGGGGCAATCTTGGCAACAATCTTTTGGCACCTGGACGATTCCCCGAAAGGAGTCCAAGAGCGCGTGGGGTTCTTCGCGTTCGCCATGTCCACCACGTTCTACACGTGCGCCGAAGCCATGCCGGTGTTCCTCCAAGAGCGCTACATCTTCATGAGAGAAACCGCACACAACGCGTACCGTCGCTCGTCCTACGTGCTCGCGCACGCAATCATTTCCCTCCCTTCCTTGCTTTTTCTCTCCCTCGCATTTGCGGCCACAACGTTTTGGGCCGTGGGCATGACCGGCGGCACTTCGGGCTTCCTCTTTTATTTTATCACAATTTTGGCCTCGTTTTGGGCCGGGAACTCGTTCGTGACGTTCCTCTCCGGCGTGGTGTCGCACGTGATGATAGGGTTCACCGTGGTGGTTGCAATTCTGGCTTACTTCCTCCTCTTCAGCGGGTTCTTCATCAGCAGGGACAGGATCCCTCCGTACTGGATATGGTTCCACTACCTTTCGCTGGTGAAGTACCCGTACGAGGGAGTGCTGCAGAATGAGTTCGATGTGAGGTCTCCGAGGTGTTTTGTGAGAGGGATTCAGATGTTCGAGAACACGCCGCTGGGGATGGTGCCGGAAGCCCTGAAGGTGGAGCTGCTCAAGAGCATGAGCCAGACTCTAGGAATGAACATCACGAGGTCCACCTGCGTGGTCACCGGAGAGGATGTGCTGAAGCAGCAGGGGATCACGCAGCTGACCAAGTGGAACTGCTTGTGGATCACGCTGGCTTGGGGGTTCTTCTTTCGCTTCCTCTTTTATTTGGCGCTGCTCTTTGGGAGCAGGAACAAGAGGAGGTAG 2211 0.4939 MSRLTPSPTNPVHEDRLPFFNQSMELVQPPTRTRSRTLGDLLKRVEDAQNDTPLAPPHHVLDLSSSSATHPFVLSFTNLTYNVNLRRKFTFFPATTASAPDHETKPNGTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLRGTVKLNGDVLESSLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSFSKSKKKARVQALIDQLGLRSAASTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILSLLDHLIFLSHGNTVFSGSPANLPAFFSEFGHPIPENENRTEFALDLIRELEQEATGTKSLVDFNKSWQLKNKNQAQAQNEYDSKLSLKDAISASISRGKLVSGTNGNGRNNSTALVSVPAFANSFWMEMLVIGKRSLTNSRRMPELFGIRLGAVLVTGAILATIFWHLDDSPKGVQERVGFFAFAMSTTFYTCAEAMPVFLQERYIFMRETAHNAYRRSSYVLAHAIISLPSLLFLSLAFAATTFWAVGMTGGTSGFLFYFITILASFWAGNSFVTFLSGVVSHVMIGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFDVRSPRCFVRGIQMFENTPLGMVPEALKVELLKSMSQTLGMNITRSTCVVTGEDVLKQQGITQLTKWNCLWITLAWGFFFRFLFYLALLFGSRNKRR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01662 736 Pfam ABC transporter 113 265 IPR003439 GO:0005524
Gma19g01662 736 Pfam ABC-2 type transporter 294 383 IPR043926 GO:0140359
Gma19g01662 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 337 IPR003439 GO:0005524
Gma19g01662 736 Gene3D - 102 328 IPR027417 -
Gma19g01662 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 34 729 - -
Gma19g01662 736 SMART AAA_5 122 337 IPR003593 -
Gma19g01662 736 ProSitePatterns ABC transporters family signature. 237 251 IPR017871 GO:0005524
Gma19g01662 736 Pfam ABC-2 type transporter 432 639 IPR013525 GO:0016020|GO:0140359
Gma19g01662 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 729 - -
Gma19g01662 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01662 Gma-Chr19 45996061 45998271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01662 112 297 Calmodulin-binding Proteins AT2G36910 30.159 4.67e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01662 K05681 - gmx:100781319 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01662 19 45996061 45998271 Gma19g01662 19 45996061 45998271 ECH
Gma19g01662 19 45996061 45998271 Gma03g01617 03 42365575 42368173 GST