Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01654 ATGAGAAAGTTGTGTTTTAACCCCCAAACAGAGTCGTTTGCGTTGGCCCGCAGTTCTCCTTCTTCACCACTATCCTTAACCTCAAGCCCAACTCCTCCGAGGCTGAGCTTTTCCGAAGCTGAGGCACTGATACTGaaatggaaccctgacacttccgcttacgccaaagtcacttccctcttctacgaggacaaaaccgaagccaaacactacattgactccgttaaccagcttcagaaatccatgcattccttgctctctcagaacccttcctctgagaaactcattctcgctcataacctaatgcagatggctatgaagaggctcaagaaagagttctaccagatcttatccatgaaccgcgcacaccttgatccagaatccgtctccgccagatcctctcgcacctccgccaactccagcgcctccgattacgacgacgacttcgctgctgaggacgacgatatccgcgccgccggcgactctatctccgaagtcgagcagaaagactcttccaagtcggcggtgaacggcggtggcgtgcacccgctcacgattcagacgatgaattacCTTTCAGTCCTCGCCGATTACATCAACGTGCTCTCTGATATATTCCCGCGCGACTGGCTTCCGCCGCCAAAGTCTTCGTCGCTGCCGGAATCTTATTTATACAGTCCGGAGTCTGATTACTCGGCGTCGAAGCCGGCGCTGACGGCGCGTTTTGCGTGGCTAATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAGGCGAAGCATTGCAAGGACGTTTCGCTGTCTTACCTCTTTCTCGCTAACAATCTCTGGTACGTTGTCGCCAGAGTGCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCCTTAAGCACGAAGCTAAAGCGAAGAGGTTCGTCGCGAACTACGAGAAGGtggcgtggggagaagtggtttcgtcattgccggaaaatccagccgcggcggaggcgagggaggtgttcgagagcttcaaccgcaaattcgaggaagggtatcggaaacagaactcattcgtcgtagctgaccgcgaattacgagacgaaataaaaggttcgatcgcgagaagcatagtgccaagatatcgcgagtGGTATAATGTTGTTCTTGCTACGGTGGGAACAGTGAGGGATTTGACGGCGACGGAGTACGTGACCTTTACCCCTGAGGATATTGAAAATTACCTGGTTAACCTCTTCTTTTTTGGAACCTCATCCAGTGCTGTATCGTCCTCGCCTCTCCGGCGTTGGAGCTAA 1293 0.266 MRKLCFNPQTESFALARSSPSSPLSLTSSPTPPRLSFSEAEALILKWNPDTSAYAKVTSLFYEDKTEAKHYIDSVNQLQKSMHSLLSQNPSSEKLILAHNLMQMAMKRLKKEFYQILSMNRAHLDPESVSARSSRTSANSSASDYDDDFAAEDDDIRAAGDSISEVEQKDSSKSAVNGGGVHPLTIQTMNYLSVLADYINVLSDIFPRDWLPPPKSSSLPESYLYSPESDYSASKPALTARFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWILKHEAKAKRFVANYEKVAWGEVVSSLPENPAAAEAREVFESFNRKFEEGYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNVVLATVGTVRDLTATEYVTFTPEDIENYLVNLFFFGTSSSAVSSSPLRRWS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01654 430 MobiDBLite consensus disorder prediction 125 148 - -
Gma19g01654 430 Gene3D Exocyst complex component Exo70 156 420 - -
Gma19g01654 430 SUPERFAMILY Cullin repeat-like 37 132 IPR016159 -
Gma19g01654 430 MobiDBLite consensus disorder prediction 127 144 - -
Gma19g01654 430 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 168 - -
Gma19g01654 430 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 168 418 - -
Gma19g01654 430 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 168 IPR004140 GO:0000145|GO:0006887
Gma19g01654 430 PANTHER EXOCYST COMPLEX PROTEIN EXO70 168 418 IPR004140 GO:0000145|GO:0006887
Gma19g01654 430 Pfam Exo70 exocyst complex subunit 160 408 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma19g01654 430 SUPERFAMILY Cullin repeat-like 167 412 IPR016159 -
Gma19g01654 430 Gene3D Exocyst complex component Exo70 60 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01654 Gma-Chr19 45923210 45925066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01654 168 412 EXO70 exocyst subunit family AT3G09520 53.360 2.42e-79 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01654 K07195 - gmx:100786852 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01654 19 45923210 45925066 Gma03g01608 03 42290109 42291626 GST
Gma19g01654 19 45923210 45925066 Gma10g01184 10 33931577 33947600 PCT
Gma19g01654 19 45923210 45925066 Gma20g00717 20 27493865 27545995 PCT
Gma10g00431 10 4144430 4146298 Gma19g01654 19 45923210 45925066 PCT
Gma13g01139 13 25548335 25550215 Gma19g01654 19 45923210 45925066 PCT