Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01648 ATGTACTGCAAGCAGGAGGTTAGGAATGGAATGGTTCCAAACCATGCTTATCCATTTGTGTTTTACAGGGGAATGCCACGCAATGGTTGTTCGCTCAAGTACCGTGAGGCTGCAAGGACTGAAGTTGAAGTCTGGTTGAGGCTAGCCAGACATGATGTTGACGGTGCACGTTGTGTGCAGATACGGAATTGGTTTGACTATCTTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAATTATCGTTCTTTATCAATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATCACACTGATTTGAAGCCAGAGAACATTCTTCTTGTCTCATCAGAATTCATTAAAGTGCCAGACTATAAGTTTCTATCACGGAACACAAAAGATGGCTCCTATTTCAAGAATCTACCCAAGTGTCTTGGGTGGAACTATGATCTTTGGAGTGTGGGCTGCATACTGGTTGTTGAGCTTTGCTCTGGAGAGGCAGTTTTCCAAACACATGAGAACTTGGAACATCTTGCCATGATGGAGAGAGTTTTAGAACCACTACCTCCGAATATGGTGGTCAGGGTCGAAGGTACACGATTAAGTTGGCCTGATAGTTCAACTTCAAGAGAAAGCATGAGAGCAGTTTGGAAATTGCCACAGTTGCCGAACCTCATAAGGCAGCATGTTGATCATTCTGCTGGCGATTTGATTGACCTCTTGCAAGGGCTTCTGAGGTACGACCCTTCAGAACCACTTAAAGCTAAGGAAGCAATGAGACACCACTTCTTCTTCACAAGAGATACTAAAAGATATGGTTACCCTTTATAA 864 0.4271 MYCKQEVRNGMVPNHAYPFVFYRGMPRNGCSLKYREAARTEVEVWLRLARHDVDGARCVQIRNWFDYLNHICIVFEKLGPSLYDFLRKNNYRSLSIDLVREFGRQLLESVAFMHHTDLKPENILLVSSEFIKVPDYKFLSRNTKDGSYFKNLPKCLGWNYDLWSVGCILVVELCSGEAVFQTHENLEHLAMMERVLEPLPPNMVVRVEGTRLSWPDSSTSRESMRAVWKLPQLPNLIRQHVDHSAGDLIDLLQGLLRYDPSEPLKAKEAMRHHFFFTRDTKRYGYPL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01648 287 SUPERFAMILY Protein kinase-like (PK-like) 31 278 IPR011009 -
Gma19g01648 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Gma19g01648 287 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 156 279 - -
Gma19g01648 287 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 33 154 - -
Gma19g01648 287 Pfam Protein kinase domain 36 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01648 287 Gene3D Transferase(Phosphotransferase) domain 1 51 132 - -
Gma19g01648 287 SMART serkin_6 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01648 287 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01648 287 PANTHER BNAA07G37640D PROTEIN 156 279 - -
Gma19g01648 287 PANTHER BNAA07G37640D PROTEIN 33 154 - -
Gma19g01648 287 Gene3D Phosphorylase Kinase; domain 1 33 77 - -
Gma19g01648 287 Gene3D Transferase(Phosphotransferase) domain 1 151 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01648 Gma-Chr19 45867135 45870489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01648 36 275 MAP Kinase Gene Family AT2G46070 27.170 5.65e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Gma19g01648 Pkinase 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01648 K08287 - gmx:100808061 447.973