Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01642 ATGGCTGGTAATAAACAAAAACTCTTTAACAGACTGAAGCCATTCATAGGTGTAGTGTTCTTACAGTTTGGATATGCTGGCATGGATGTTCTATCCAAAGCTGCACTGAACAAGGGAATGAGTAACTATGTATTTGTCGTGTACCGTCATGTTTTTGCCTTTGTTGTCACGGCCCCTTTTGCACTGATCTTGGAGAAGAAAGTAAGGCCGAAGATGACATTTTCAATTTTCATGAAGATAATGATTCTCAGCTTGCTAGAGCCTGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTGTCATGGCTTGGATTTTTAGGCTTGAGAAGGTAAAACTAAAAAGTATACGCAGTCAAGCAAAGGTGGTGGGGACTTTAGCAACTGTTGCAGGTGCCATGGTCATGACACTGATAAAGGGCCCAGTACTTGATCTTTTTGGAACACACACAAGCAATACCCACAACCAGCAAAATGGTGGGGTGAATCTTCAACATGCAATAAAGGGATCGGTCATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAGTTGAAGGTGGTGTAGTGGCACTGGTTATGGAAAGGAAGAATCTTTCTGCTTGGTCTCTGCAATGGGATACAAAACTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAAGATAGGGGACCGGTCTTTGTTACAACTTTTAACCCTCTCTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCTGAAATAATGTACCTCGGGAGGGCGGTTGGAGCTATTGTAATTATTTTAGGGCTGTATCTTGTGGTGTGGGGTAAAAGCCAAGACTACGAGTCATCAAGTCCAATTACTAAAGAGCATATATTGGCATCCAAGCAAACAGTAGAGGAGAACAACGGCAAAGAGGAGGATCATTCTAATCATGGGGTCATCACTCTCAGTAACTTAGGCGCGGGAAACATAGCACGAGATGAACAAGTATGA 1152 0.4314 MAGNKQKLFNRLKPFIGVVFLQFGYAGMDVLSKAALNKGMSNYVFVVYRHVFAFVVTAPFALILEKKVRPKMTFSIFMKIMILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWIFRLEKVKLKSIRSQAKVVGTLATVAGAMVMTLIKGPVLDLFGTHTSNTHNQQNGGVNLQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGVVALVMERKNLSAWSLQWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEIMYLGRAVGAIVIILGLYLVVWGKSQDYESSSPITKEHILASKQTVEENNGKEEDHSNHGVITLSNLGAGNIARDEQV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01642 383 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Gma19g01642 383 PANTHER WAT1-RELATED PROTEIN 9 352 - -
Gma19g01642 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Gma19g01642 383 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020|GO:0016021
Gma19g01642 383 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Gma19g01642 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01642 Gma-Chr19 45809888 45813248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01642 4 373 Nodulin-like Gene Family AT2G37460 64.595 9.97e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01642 - - gmx:100777050 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01642 19 45809888 45813248 Gma19g01642 19 45809888 45813248 ECH
Gma19g01642 19 45809888 45813248 Gma03g01594 03 42180173 42183081 GST
Gma19g01642 19 45809888 45813248 Gma10g00419 10 4029808 4034166 PCT
Gma19g01642 19 45809888 45813248 Gma13g01126 13 25407044 25411537 PCT
Gma10g00419 10 4029808 4034166 Gma19g01642 19 45809888 45813248 PCT
Gma13g01126 13 25407044 25411537 Gma19g01642 19 45809888 45813248 PCT