Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01637 ATGGCTTTTATGTCTGGAGTTCAGCGTCTGCTTCGCCGCACTCCACTTGTTCATTCCCACTATGCTTCTATTCGTCTCAGCTCAACTCTCACTTCCCCCAAACTTTTCGTAAGCGGTCTTTGTAGACTGACAACAGATGAAAAACTTAAGGAAGCATTTTCGTCTTTTGGGCAGCTGGTTGAAGCTAAGGTGATAATTGATAGAGCCTCTGGAAGATCAAAGGGGTTTGCTTTTGTAACTTATACAACCATAGAGGAAGCTGAAAAGGCAAGAGAAGGAATGAACGCTAAATTTTTGGATGGATGGGTTATATTTGTTGATCCTGCCAAGCCAAGAGAGCCCAGACCTCCCCAGCAGTCACAGTCTCAACCCTCTGAAACAGGTTTCACTGTCAACAAAACGGTTGGGTGGTGTGGTTGA 420 0.45 MAFMSGVQRLLRRTPLVHSHYASIRLSSTLTSPKLFVSGLCRLTTDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSETGFTVNKTVGWCG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01637 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Gma19g01637 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 101 IPR000504 GO:0003723
Gma19g01637 139 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 139 - -
Gma19g01637 139 SUPERFAMILY RNA-binding domain, RBD 31 129 IPR035979 GO:0003676
Gma19g01637 139 PANTHER NUCLEOLAR PROTEIN 8 1 139 - -
Gma19g01637 139 Gene3D - 25 132 IPR012677 -
Gma19g01637 139 SMART rrm1_1 34 107 IPR000504 GO:0003723
Gma19g01637 139 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01637 Gma-Chr19 45764323 45767080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01637 34 126 Eukaryotic Initiation Factors Gene Family AT3G16380 36.458 3.88e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01637 - - gmx:100306326 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01637 19 45764323 45767080 Gma19g01637 19 45764323 45767080 ECH
Gma19g01637 19 45764323 45767080 Gma03g01588 03 42138369 42140565 GST