Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01633 ATGGCGGCGTCGCGGCGGCTCCGGGACCTCCAATCCCAACCGGCGAACAAGATCTGCGTCGACTGTTCCCAGAAGAACCCGCAATGGGCCTCGGTTTCCTACGGCGTCTTCATGTGCCTGGAGTGCTCCGGCAAGCACCGCGGCCTCGGCGTGCACATCTCCTTCGTGCGATCCGTGACGATGGATTCGTGGTCTGAAATCCAGATCAAGAAGATGGAAGCCGGAGGCAACGACAAACTCAACGCGTTTCTCTTGCAGTACGGCATCCCCAAGGAAACCGATATCGTCGCCAAGTATAACTCCAACGCTGCCTCCGTCTACCGCGACCGCATCCAGGCCCTCGCCGACGGCCGCCCCTGGCGGGATCCCCCCGTCGTCAAGGAAGCCGTCCGTTCCTCCTCCGCTGCATTCAAGGGCAAGCCGCCGCTCTCGGCTAGCAGCAACAACAACGGCGGATGGGATAATTGGGACGCCGACGACGGATTCGGATCGGCCAGGGGCGGGTCGGATCTCAGGCGGAACCAGTCCACCGGGGACGTGAGGGGATTCGGCGGCGGCGGGAACGTGGCGAGGTCAAAATCGACGCAGGATATTTACACGCGGGCTGAATTGGAAGCTTCTGCTGCCAACAAAGAAGAATTCTTCGCGCGGAAGAGAGCGGAGAATGAGTCGCGGCCGGAGGGGCTTCCGCCGTCGCAGGGTGGCAAGTATGTTGGATTCGGATCTGGCCCCGCCCCGCCCCAGAGGGGTAATCAGCAAAACGATTATTTCTCTGTCGTTTCTCAGGTAAAAGAGGGTGGTTATGATTACAAGGTCAATGAAACTGTCAATGTTGTCTCTCAGAAGACAACAGAGATTGGACAAAGGACATGGGGTATGATGAAAGGGGTCATGGCATTGGCTTCACAGAAGGTTGAGGAATTCGCTAGAGATAACCCGAATTGGACGTCTGATAACTGGCAACGAAATGAAAGTGATAGAAATGGTTTCTACCAGGAGTTCAATCGAGAGAATAATGGCCGGAATTCTTCTACCAGAGAAGGACAACATTCTTCAGGTGGACAAACTAATACTTTTCACTCAAGCTCTTGGGATGATTGGGGCCACAATGATTTTAGGAAGGAAGAGCCAGCTAAAGGATCAGCTCCTCAGTCATCAGGTGGGAAGTTTGATAATTATAACTCGAGCTCCTGGGATGATTGGGACCAGGAAGATACAAGGAAGAAAGAACCAGCTAAAGGGTGCTGCCTGGACAGGAGGAGGCTTTCTCTAAGGTTTGACCCGATCTCTATCAGCAGGATCAAAGTTTTGTTGGAAATGACCTCTTGGACTGGTGGCATGCAAACCGAGCAGGGGTGTTGTTTAGTATGA 1371 0.5427 MAASRRLRDLQSQPANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNDKLNAFLLQYGIPKETDIVAKYNSNAASVYRDRIQALADGRPWRDPPVVKEAVRSSSAAFKGKPPLSASSNNNGGWDNWDADDGFGSARGGSDLRRNQSTGDVRGFGGGGNVARSKSTQDIYTRAELEASAANKEEFFARKRAENESRPEGLPPSQGGKYVGFGSGPAPPQRGNQQNDYFSVVSQVKEGGYDYKVNETVNVVSQKTTEIGQRTWGMMKGVMALASQKVEEFARDNPNWTSDNWQRNESDRNGFYQEFNRENNGRNSSTREGQHSSGGQTNTFHSSSWDDWGHNDFRKEEPAKGSAPQSSGGKFDNYNSSSWDDWDQEDTRKKEPAKGCCLDRRRLSLRFDPISISRIKVLLEMTSWTGGMQTEQGCCLV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01633 456 SUPERFAMILY ArfGap/RecO-like zinc finger 5 111 IPR037278 -
Gma19g01633 456 MobiDBLite consensus disorder prediction 219 251 - -
Gma19g01633 456 CDD ArfGap_ArfGap1 3 117 - -
Gma19g01633 456 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Gma19g01633 456 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Gma19g01633 456 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Gma19g01633 456 Pfam Putative GTPase activating protein for Arf 5 105 IPR001164 GO:0005096
Gma19g01633 456 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Gma19g01633 456 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Gma19g01633 456 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 262 - -
Gma19g01633 456 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 260 385 - -
Gma19g01633 456 MobiDBLite consensus disorder prediction 131 194 - -
Gma19g01633 456 MobiDBLite consensus disorder prediction 333 365 - -
Gma19g01633 456 MobiDBLite consensus disorder prediction 385 399 - -
Gma19g01633 456 MobiDBLite consensus disorder prediction 333 412 - -
Gma19g01633 456 SMART arf_gap_3 1 120 IPR001164 GO:0005096
Gma19g01633 456 MobiDBLite consensus disorder prediction 139 154 - -
Gma19g01633 456 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 262 IPR044519 GO:0005096|GO:0016192
Gma19g01633 456 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 260 385 IPR044519 GO:0005096|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01633 Gma-Chr19 45731847 45735641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01633 5 83 C2H2 Transcription Factor Family AT4G05330 52.500 1.15e-22 96.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01633 19 45731847 45735641 Gma19g01633 19 45731847 45735641 ECH
Gma19g01633 19 45731847 45735641 Gma03g01583 03 42101050 42105286 GST
Gma19g01633 19 45731847 45735641 Gma10g00409 10 3944522 3949953 PCT
Gma19g01633 19 45731847 45735641 Gma13g01113 13 25307131 25311747 PCT
Gma10g00409 10 3944522 3949953 Gma19g01633 19 45731847 45735641 PCT
Gma13g01113 13 25307131 25311747 Gma19g01633 19 45731847 45735641 PCT