Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01629 atggccggaaaaggagagggtcctgctatcggaatcgatctcggaaccacctactcttgtgtcggtgtgtggcaacatgaccgagttgaaatcatcgccaacgaccaagggaacagaacgacgccgtcttacgtcggcttcactgataccgagcgtctcatcggtgatgcggctaagaaccaagtcgccatgaaccccatcaacaccgtcttcgatgccaagaggttgattggtcgtagattcagtgactcctctgttcagagtgatatcaaattgtggccttttaaggtcattgctggtgctgctgacaagccaatgatcgtggttaactacaagggtgaagagaagcaatttgctgcagaagaaatctcttctatggtgctcatcaagatgcgtgagattgctgaggcttaccttggctccacggtgaagaatgctgttgtcactgtccctgcttacttcaatgattctcagcgtcaagctaccaaggatgctggagtcattgctggtcttaatgtgatgcgaattatcaatgagcctactgcagctgccattgcttatggtcttgataagaaggccacaagtgttggtgagaagaatgtgttgatttttgaccttggtggtgggacatttgatgtttctttactaaccattgaggagggtatctttgaggtgaaagccacagctggtgacacccatcttggaggtgaggattttgataacagaatggtgaaccactttgttcaagagtttaagagaaagaacaagaaggacataagtgggaaccccagagcaCTTAGAAGGTTGAGGACTGCTTGTGAGAGGGCCAAGAGAACATTGTCATCCACTGCCCAGACCACCATTGAAATTGATTCTCTCTATGAGGGAATTGATTTCTACTCCACTGTTACTCGTGCCAGATTCGAGGAACTGAACATGGATCTCTTTAGGAAGTGTATGGAGCCGGTGGAGAAATGTTTGAGGGATGCTAAAATGGACAAAAGAAGTGTTGATGATGTTGTTCTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAACAACTGCTGCAGGACTTCTTTAATGGAAAGGAGCTGTGCAAGAGCATCAATCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCTGCAATTTTAAGTGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTCCTTGATGTCACCCCTCTATCTCTTGGTTTGGAGACTGCTGGCGGTGTGATGACTGTCTTGATCCCTAGGAACACTACAATTCCAACCAAGAAGGAACAGGTTTTCTCAACATACTCTGACAACCAGCCTGGTGTGTTGAtccaggtctttgaaggtgaaagagcaaggactaaagataacaatttgttgggcaaatttgaACTTTCTGGCATTCCTCCTGCCCCCAGGGGTGTTCCTCAGATTACTGTGTGCTTTGACATTGATGCCAATGGTATTTTGAACGTCTCTGCCGAAGATAAGACCACTGGCCAGAAAAATAAGATCACTATCACCAATGACAAGGGTAGACTGTCAAAGGAAGATATCGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCTGAGGATGAAGAGCACAAAAAGAAGGTTGAGGCCAAGAATGCTTTGGAAAACTATGCATACAACATGAGGAACACTGTGAAGGATGACAAAATTGGTGAGAAACTTGATCCTACTGACAAGAAGAAGATTGAGGACGCAATTGAGCAAGCTATCCAGTGGCTAGACAGCAACCAGCTCGCAGAAGCAGATGAATTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAATCCTATCATTGCCAAGATGTACCAAGGTGGTGCTGGTCCTGACATGGGTGGTGCTGGTGCTGGGGCAGCCGAGGATGATTATGCTGCTCCTTCTGGTGGAAGTGGTGCTGGCCCCAAGATTGAGGAAGTGGACTAA 1965 0.2595 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIAGAADKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTVTRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDDKIGEKLDPTDKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDMGGAGAGAAEDDYAAPSGGSGAGPKIEEVD 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01629 654 Gene3D - 546 619 IPR029048 -
Gma19g01629 654 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Gma19g01629 654 Gene3D Actin; Chain A, domain 4 235 318 - -
Gma19g01629 654 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Gma19g01629 654 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Gma19g01629 654 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Gma19g01629 654 Coils Coil 521 541 - -
Gma19g01629 654 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Gma19g01629 654 MobiDBLite consensus disorder prediction 619 654 - -
Gma19g01629 654 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Gma19g01629 654 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 8 21 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 36 48 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 58 66 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 146 166 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 209 219 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 337 353 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 369 389 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 396 415 - -
Gma19g01629 654 PRINTS 70kDa heat shock protein signature 477 493 - -
Gma19g01629 654 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Gma19g01629 654 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Gma19g01629 654 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Gma19g01629 654 Gene3D - 192 366 - -
Gma19g01629 654 Gene3D - 71 126 - -
Gma19g01629 654 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Gma19g01629 654 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Gma19g01629 654 Gene3D - 10 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01629 Gma-Chr19 45711360 45714358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01629 1 654 Calmodulin-binding Proteins AT3G12580 91.590 0.0 1221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01577 03 42049249 42052324 Gma19g01629 19 45711360 45714358 ECH
Gma19g01629 19 45711360 45714358 Gma19g01629 19 45711360 45714358 ECH
Gma12g00569 12 4778943 4781861 Gma19g01629 19 45711360 45714358 ECH
Gma19g01629 19 45711360 45714358 Gma12g00569 12 4778943 4781861 ECH
Gma19g01629 19 45711360 45714358 Gma03g01577 03 42049249 42052324 GST
Gma19g01629 19 45711360 45714358 Gma13g01110 13 25281936 25285036 PCT
Gma13g01110 13 25281936 25285036 Gma19g01629 19 45711360 45714358 PCT