Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01621 ATGGCACCTAAAAACTTGGGCACCAAATTAACAGCACTTGTTGTAGATGACAATATACTCAACCGAAAGATTCATCAAAAGCTGTTGGAGAGTGTTGGCGTGAAAAATCAAGGAGTGGAAAATGGCCAAGAAGCAGTGGACATTCATTGCCATGGGCAAATATTTGACCTGATTCTCATGGACATGGATATGCCCATCATGAATGGCATTGAGGCAACAAAGGAACTTCGCTCAATGGGCATTGGTAGCATGATTGTCGGTGTGTCATCACGCTGTACGGAAGCAGAAATACGAAAATTTATGGAAGCGGGGCTGAATGACTACCATGAGAAACCCTTGAACAATGCTAAGCTTAGTTCAATTCTTGATAAGATCAACCCTAGTTTTACTCGTAATTAG 399 0.4185 MAPKNLGTKLTALVVDDNILNRKIHQKLLESVGVKNQGVENGQEAVDIHCHGQIFDLILMDMDMPIMNGIEATKELRSMGIGSMIVGVSSRCTEAEIRKFMEAGLNDYHEKPLNNAKLSSILDKINPSFTRN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01621 132 SUPERFAMILY CheY-like 8 125 IPR011006 -
Gma19g01621 132 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Gma19g01621 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 129 - -
Gma19g01621 132 SMART REC_2 10 122 IPR001789 GO:0000160
Gma19g01621 132 Gene3D - 2 129 - -
Gma19g01621 132 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
Gma19g01621 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 5 129 - -
Gma19g01621 132 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01621 Gma-Chr19 45659644 45660257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01621 10 122 Response Regulator Gene Family AT3G04280 47.826 1.11e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma19g01621 Response_reg 2.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01621 - - gmx:100794931 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01621 19 45659644 45660257 Gma19g01621 19 45659644 45660257 ECH
Gma19g01621 19 45659644 45660257 Gma03g01568 03 41974958 41975480 GST