Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01616 TCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGACCAGAGTGGAAGAATATCAGGAGCTGCTATCAGGACTTATCTGCTTGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAACTATCATTGTTTCTACATGCTCTGTGCTGCACCTCCGGAGGATGTTAAAAAGTACAAATTAGGAGATCCAAGAATGTTTCATTATCTGAATCAATCAAATTGCTTTGAGTTGGAAGGGGTTGATGAATCTAAAGAATATAGGGATACAAGGAGAGCAATGGATATTGTTGGAATAAGTTCTGAGGAGCAGGATGCAATATTTAAAGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCGAAAGGGAAGGAGATAGACTCATCTATGCCCAAAGATGAAAAATCTCGGTTCCATCTACAGACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACAATTACAAAATGGCTGGATCCGGAAGCTGCTGCACTCAGCCGAGATGCCTTGGCTAAGATTGTGTACACAAGATTGTTTGACTGGTTGGTTGATAAAATTAATAATTCTATTGGTCAAGACCCCGAGTCAAAATCCTTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTGTGGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGATCTACACACGAAACTTTTGCCCAAAAGCTATATCAGACCTTCAAAAATCACAAAAGGTTTAGCAAGCCTAAATTATCACGTAGTGACTTCACAATTTGCCATTATGCAGGAGATGTAACTTATCAAACTGAATTGTTCCTCGACAAGAACAAGGATTATGTTGTTGCAGAGCACCAAGCACTTCTTTATGCTTCCAAATGCCCCTTTGTATCGGGCTTGTTTCCCCCTTCACCCGAAGAATCTTCTAAACAATCAAAGTTCTCTTCAATTGGTTCACGATTTAAGCAACAATTGCAATCTTTACTTGAAACTCTCAGTGCCACTGAGCCACACTACATTCGTTGTGTAAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTCTGCTGCAACTACGTTGTGGGGGAGTTATGGAAGCAATTAGGATAAGCTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGCCTTCTTGCACCTGAAGCATTGGCTGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAAAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAGATGGCAGAACTAGATACCCGCAGAACTGAAATCTTGGGGAGGTCAGCAAGCATTATTCAGAGAAAAGTTCGTTCCTATTTGGCCTGCCAAAGTTTCATCTTGCTTCGTTTGTCTGCTGTGCAGATTCAAGCTGCGTGCAGAGGACAACTTGCACGGCAAGTGTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTAGTGATTCAGAGGTGCTTCCGCATGCATATTGCTTGGAAGGCATACAAAGATCTGTATACCTCTGCTATCTCTATCCAGACTGGTATGCGGGGGATGGCTGCTCATTGTGAGCTACACTTCAGAAGGCAAACTAAAGCAGCAATTGCCATTCAGAGCCACTGCCGGAAATACTTGGCACAACTTCATTTCGCAAAATTAAAGAAGGCAGCAATTACAACGCAATGTGCATGCAGAGGAAAAGTTGCTCGGCGAGAATTGCGAAAGCTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCCAAAAGTAAGCTTGAAGAGCAAGTTGAAGACCTTACATTAAGATTGCAGCTGGAAAAACGTTTGCGGGTTGACATCGAAGAAGCAAAAGCACAAGAAAATCAAAGATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAAACTAAGCTACTTCTTGAAAAGGAGAGGGAGGCTACAAAAAAAGCAGCTGAGAGAGCGGCTGTCATACAGGAAGTTCCAGTTGTTGACAATGCTTTGTTGGAGAAGCTCAGAAGTGAGAATGAGAAACTCAAGAACATGGTGAGTTCGCTGGAAAAGAAAATTGATGAAACGGAAAAAAGGTATGAAGAGGCAAACAAAATTGGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAGTCAAAAGTAATCCATTTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCATAGACATGGAATCTGCAAACCATATTCTTCAGAAACAATCTCTATTAAACTCATCTGTGAAAACAATAGCAGAGCACCTGTCTTCCCCATTGGACGAGAAGTTAGAAAATGGTCACCATGCGGCAGAAGAGCAGGAAGCTGTTGATACATTTGTTACACCTGTGAAACAATTTGGTACTGAATCAGACAGTAAATTGAGAAGATCTTACAATGAACGACAACATGAGAGTGTTGATTCACTTGTCAACTGTGTTATGAAAAATATTGGATTCAATCATGGAAAACCCATTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTTGATCGCCTCATCCAAATGATTGGTTCCGAAATTGAGAATCAAGACGACAATGATCATATGGCCTATTGGCTGTCAAATACTTCTGCGTTATTGTTTTTACTTGAACAAAGCCTGAAATCTGGGAGTTCAGCAAAAGCTACCCCAGCTAGAAAACTGCCTAATCCAACATCTCTTTTTGGAAGAATGACTATGAGTTTTCTTTCATCCCCTTCTTCTGCCAACCTTGCTGCTCCTCCAGCAGATGTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTGCTTTTCAAGCAGCAGCTCACAGCCTATTTCGAGAAAATATATGGCATCATTCGAGATAATTTGAAGAAGGATTTAACACCGGTTCTTGCATTATGCATCCAGGCACCAAGAATATCAAAGGGAGGGTTACGTTCTAACCGATCCCTTGCTAAGGACTCCCCAGTAGTTCACTGGCAGAGTATTATTGAATCCCTCAATACACTCCTCTGTACACTGAAAGAGAACTTTGTGCCACCAGTTCTTATCCAAAAGATCTTTAGTCAAACATTCTCATATATTAATGTGCAACTCTTCAATAGTCTTCTTCTTCGTCGTGATTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAGTTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATCAATGATTTATGCCCCATCTTGAGTGTCCAGCAGCTATATAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGGATGCTAATGGCTGAGGACTCCAACAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTGGATGATCTCTCTACATCACTGCAAGAGAAGGACTTCTCAGACATGAAACCAGCAGACGAGCTTCTCGAGAATCCAGCCTTCCAGTTCTTAAAGGAGTTGGCGCAGGAAGCTTAG 3972 0.4094 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRMFHYLNQSNCFELEGVDESKEYRDTRRAMDIVGISSEEQDAIFKVVAAILHLGNIEFAKGKEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALAGSSDEVTACKRILKNVGLEGYQIGKTKVFLRAGQMAELDTRRTEILGRSASIIQRKVRSYLACQSFILLRLSAVQIQAACRGQLARQVYEGMRQEASSLVIQRCFRMHIAWKAYKDLYTSAISIQTGMRGMAAHCELHFRRQTKAAIAIQSHCRKYLAQLHFAKLKKAAITTQCACRGKVARRELRKLKMAARETGALQAAKSKLEEQVEDLTLRLQLEKRLRVDIEEAKAQENQRLQSALQEMQLQFKETKLLLEKEREATKKAAERAAVIQEVPVVDNALLEKLRSENEKLKNMVSSLEKKIDETEKRYEEANKIGEERLKQALDAESKVIHLKTAMQRLEEKFIDMESANHILQKQSLLNSSVKTIAEHLSSPLDEKLENGHHAAEEQEAVDTFVTPVKQFGTESDSKLRRSYNERQHESVDSLVNCVMKNIGFNHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQDDNDHMAYWLSNTSALLFLLEQSLKSGSSAKATPARKLPNPTSLFGRMTMSFLSSPSSANLAAPPADVVRKVEAKYPALLFKQQLTAYFEKIYGIIRDNLKKDLTPVLALCIQAPRISKGGLRSNRSLAKDSPVVHWQSIIESLNTLLCTLKENFVPPVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLSSMRMLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFLKELAQEA 1323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01616 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 592 IPR027417 -
Gma19g01616 1323 Gene3D - 59 117 - -
Gma19g01616 1323 Gene3D - 473 540 - -
Gma19g01616 1323 Gene3D Kinesin motor domain 1 469 IPR036961 -
Gma19g01616 1323 ProSiteProfiles IQ motif profile. 565 594 IPR000048 GO:0005515
Gma19g01616 1323 SMART MYSc_2a 1 540 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma19g01616 1323 Gene3D - 246 430 - -
Gma19g01616 1323 PANTHER MYOSIN 1 1316 - -
Gma19g01616 1323 ProSiteProfiles IQ motif profile. 661 690 IPR000048 GO:0005515
Gma19g01616 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 690 IPR027417 -
Gma19g01616 1323 ProSiteProfiles Dilute domain profile. 963 1264 IPR002710 -
Gma19g01616 1323 Pfam Myosin head (motor domain) 1 527 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma19g01616 1323 Coils Coil 821 855 - -
Gma19g01616 1323 ProSiteProfiles IQ motif profile. 638 667 IPR000048 GO:0005515
Gma19g01616 1323 CDD MYSc_Myo11 1 527 IPR036018 -
Gma19g01616 1323 SMART iq_5 564 586 IPR000048 GO:0005515
Gma19g01616 1323 SMART iq_5 660 682 IPR000048 GO:0005515
Gma19g01616 1323 SMART iq_5 589 611 IPR000048 GO:0005515
Gma19g01616 1323 SMART iq_5 541 563 IPR000048 GO:0005515
Gma19g01616 1323 SMART iq_5 637 659 IPR000048 GO:0005515
Gma19g01616 1323 CDD MyosinXI_CBD 914 1287 IPR037975 GO:0007015
Gma19g01616 1323 Gene3D Myosin VI head, motor domain, U50 subdomain 119 408 - -
Gma19g01616 1323 PRINTS Myosin heavy chain signature 289 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma19g01616 1323 PRINTS Myosin heavy chain signature 236 264 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma19g01616 1323 PRINTS Myosin heavy chain signature 3 30 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma19g01616 1323 Coils Coil 779 813 - -
Gma19g01616 1323 SMART DIL_2 1139 1246 IPR002710 -
Gma19g01616 1323 Pfam IQ calmodulin-binding motif 639 658 IPR000048 GO:0005515
Gma19g01616 1323 Pfam IQ calmodulin-binding motif 663 682 IPR000048 GO:0005515
Gma19g01616 1323 Pfam IQ calmodulin-binding motif 568 585 IPR000048 GO:0005515
Gma19g01616 1323 Pfam DIL domain 1140 1243 IPR002710 -
Gma19g01616 1323 Gene3D - 542 591 - -
Gma19g01616 1323 Gene3D - 592 639 - -
Gma19g01616 1323 Gene3D - 640 689 - -
Gma19g01616 1323 ProSiteProfiles Myosin motor domain profile. 1 539 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma19g01616 1323 Coils Coil 684 757 - -
Gma19g01616 1323 PANTHER MYOSIN-14 1 1316 - -
Gma19g01616 1323 ProSiteProfiles IQ motif profile. 590 619 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01616 Gma-Chr19 45540208 45554902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01616 1 1316 Myosins gene family AT5G43900 74.811 0.0 2019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01616 K10357 - gmx:100819463 2541.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01616 19 45540208 45554902 Gma19g01616 19 45540208 45554902 ECH
Gma19g01616 19 45540208 45554902 Gma03g01562 03 41850800 41868076 GST
Gma19g01616 19 45540208 45554902 Gma10g00392 10 3716854 3734730 PCT
Gma19g01616 19 45540208 45554902 Gma13g01093 13 25058578 25077334 PCT
Gma10g00392 10 3716854 3734730 Gma19g01616 19 45540208 45554902 PCT
Gma13g01093 13 25058578 25077334 Gma19g01616 19 45540208 45554902 PCT