Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01607 ATGAAACCTGAAACTTCAGGCACACAATTGAAAGTACTTCTTGTGGATGACGTTGGGATCTTCCTAGTGACTTACCGAAGGATGTTTGAAAGAGTTGGGATAAAAGATGTTACTGCTGCGAAAAATGGCAAAGAAGCCGTGGATCTTCATCGCATTAATGGTCAAAGTTTTGACCTGATTCTCATGGATAAGGACATGCCTATCATGAATGGAATTCAGGCAACAAAGGAACTTCGCTCAACGGGGATCAGTAGCAAGATTATTGGTGTGTCGTCATCAAGCCGTGAAGAGAGTAATGTACAAGAATTTGTTGAAGCGGGGCTAGATGACTACTACATGAAACCCTTGACCGAAGAAATGCTTAGAGAAATTCTTGATAAGATCAAGCCTTGA 393 0.4148 MKPETSGTQLKVLLVDDVGIFLVTYRRMFERVGIKDVTAAKNGKEAVDLHRINGQSFDLILMDKDMPIMNGIQATKELRSTGISSKIIGVSSSSREESNVQEFVEAGLDDYYMKPLTEEMLREILDKIKP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01607 130 ProSiteProfiles Response regulatory domain profile. 11 129 IPR001789 GO:0000160
Gma19g01607 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 129 - -
Gma19g01607 130 CDD REC_hyHK_CKI1_RcsC-like 12 125 - -
Gma19g01607 130 Gene3D - 1 129 - -
Gma19g01607 130 SUPERFAMILY CheY-like 9 128 IPR011006 -
Gma19g01607 130 Pfam Response regulator receiver domain 12 125 IPR001789 GO:0000160
Gma19g01607 130 SMART REC_2 10 125 IPR001789 GO:0000160
Gma19g01607 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01607 Gma-Chr19 45449155 45449897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01607 10 118 Response Regulator Gene Family AT3G04280 45.133 1.28e-22 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma19g01607 Response_reg 6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01607 - - gmx:100813957 190.66