Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01596 ATGAAGAACAAGATGCAAATGAAAATCCAGATTTTCATTTTCTGGTACATTGGTTGTTTCTCTTATGGTTTTGCCGCTGCTGTCACAAATGAAGTATCAGCTTTGCTTTCTATAAAAGCAGGTCTCGTTGATCCGTTGAACGCCCTTCAGGATTGGAAACTGCATGGCAAAGAACCAGGACAGGATGCATCTCATTGTAACTGGACCGGCATCAAATGCAACTCAGCTGGAGCTGTAGAGAAGCTCGATCTCTCCCACAAGAATCTCAGTGGCAGAGTATCCAATGATATACAAAGACTTGAGAGTCTTACTTCTCTCAACTTGTGTTGCAATGCCTTTTCAACACCATTGCCAAAATCCATAGCCAATCTCACCACACTCAACAGCCTTGATGTAAGCCAAAATCTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAGGGCATTGAGACTTGTGGCCTTAAATGCATCCAGCAATGAGTTCTCTGGTTCTCTTCCTGAGGACCTTGCAAATGCCTCTTGCTTGGAGATGCTTGATCTCAGAGGCAGCTTCTTTGTAGGGTCAGTTCCAAAATCATTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCTGGCAATAATCTCACTGGTAAAATTCCTGGCGAGCTGGGACAACTTTCATCACTGGAGCATATGATCCTTGGATATAATGAATTTGAAGGTGGCATTCCTGATGAATTTGGAAACCTCACCAATCTTAAGTATCTTGATTTAGCAGTAGCCAATCTTGGTGGTGAGATTCCAGGCGGATTGGGAGAGCTCAAGTTGTTGAATACAGTTTTCTTATACAACAACAACTTTGACGGCAGAATTCCACCAGCAATTGGCAACATGACCTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCATCTGAAATAAGTCAGCTGAAGAATTTGAAACTTCTCAACTTCATGGGCAACAAGCTGTCTGGTCCTGTGCCTTCTGGCTTTGGAGATTTGCAACAACTGGAGGTACTTGAGTTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTGGATGTATCATCCAATTCACTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACCAAGCTTATACTATTCAACAATGCATTCACTGGTCCAATTCCATCAAGCCTATCAATGTGTCCTTCACTAATTCGTGTTCGAATTCAGAACAATTTTCTTTCTGGGACGGTTCCTGTGGGTCTTGGGAAGCTTCAAAGGTTAGAGTTGGCTAACAATAGTCTTTCTGGTGGAATTCCAGATGACATTTCCTCTTCCACATCCCTTTCCTTTATTGATCTCTCAAGAAACAAACTTCATTCTTCGCTTCCTTCCACTGTCCTTTCCATTCCAGACTTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTTCAGGACTGTCCATCACTTGCAGTTCTTGATCTCTCATCAAATCATCTATCTGGAAGCATTCCAGCAAGCATTGCTTCATGTCAGAAGTTGGTAAATTTGAACCTCCAAAACAACCAATTGACTAGTGAAATCCCAAAAGCATTAGCTAAAATGCCTACATTGGCCATGCTTGATCTTTCCAACAATTCTCTGACAGGTCAAATACCTGAAAGCTTTGGAGTTTCTCCAGCTCTGGAAGCACTCAATGTCTCATACAATAAGCTAGAAGGTCCAGTCCCAGCAAACGGAATACTAAGAACTATAAACCCAAATGATCTTCTCGGTAATGCTGGCCTATGTGGTGGTATCCTCCCTCCATGTGACCAAAACTCTGCATACTCTTCAAGACACGGAAGCTTGCGTGCAAAGCACATTATTACAGCATGGATCACTGGAATATCTTCAATCCTAGTCATCGGAATTGCAATTTTGGTAGCAAGATCTTTGTACATAAGGTGGTACACCGACGGGTTTTGCTTCCAAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCCTGGAGATTGATGGCTTTTCAGAGGCTTGGTTTTACAAGTACTGACATTCTAGCTTGCGTCAAGGAAACCAATGTGATTGGCATGGGAGCCACCGGGGTTGTTTACAAGGCCGAGGTACCGCAATCAAATACAGTTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGAGAGGTGAATGTTTTAGGGAGGCTAAGGCATAGGAACATTGTCAGATTATTAGGATTTCTTCACAATGACATCGATGTCATGATAGTTTATGAATTCATGCACAATGGCAACCTGGGAGAAGCCTTGCATGGTAGACAAGCAACAAGACTACTTGTAGACTGGGTTTCACGGTACAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTCCATCATGATTGTCATCCACCCGTTATCCATCGAGACATCAAGACAAATAACATATTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCCGGAAGAATGAAACAGTCTCCATGGTTGCTGGATCCTATGGCTACATTGCCCCTGAATATGGATATGCCTTGAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACAGGAAAGAGGCCATTAGATTCAGACTTTGGAGAGTCAATAGACATAGTAGAGTGGATTAGAATGAAGATTAGAGACAACAAATCTCTAGAAGAAGCATTAGACCCCAGCGTAGGAAACAACAGGCATGTTCTAGAAGAAATGCTTTTAGTTCTAAGAATAGCAATTCTTTGCACTGCCAAGCTCCCAAAGGACAGACCAACCATGAGGGATGTCGTAATGATGCTTGGAGAGGCAAAGCCTCGGCGAAAGAGCAGTGGCAATAGCAACGATGTAGCTAACAACAAAGAGACACCAGTTTTTAGCACGTCACCAGTTAATGATAATAACCTTGTGTAG 3060 0.4258 MKNKMQMKIQIFIFWYIGCFSYGFAAAVTNEVSALLSIKAGLVDPLNALQDWKLHGKEPGQDASHCNWTGIKCNSAGAVEKLDLSHKNLSGRVSNDIQRLESLTSLNLCCNAFSTPLPKSIANLTTLNSLDVSQNLFIGDFPLGLGRALRLVALNASSNEFSGSLPEDLANASCLEMLDLRGSFFVGSVPKSFSNLHKLKFLGLSGNNLTGKIPGELGQLSSLEHMILGYNEFEGGIPDEFGNLTNLKYLDLAVANLGGEIPGGLGELKLLNTVFLYNNNFDGRIPPAIGNMTSLQLLDLSDNMLSGKIPSEISQLKNLKLLNFMGNKLSGPVPSGFGDLQQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFTGPIPSSLSMCPSLIRVRIQNNFLSGTVPVGLGKLQRLELANNSLSGGIPDDISSSTSLSFIDLSRNKLHSSLPSTVLSIPDLQAFMVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTSEIPKALAKMPTLAMLDLSNNSLTGQIPESFGVSPALEALNVSYNKLEGPVPANGILRTINPNDLLGNAGLCGGILPPCDQNSAYSSRHGSLRAKHIITAWITGISSILVIGIAILVARSLYIRWYTDGFCFQERFYKGSKGWPWRLMAFQRLGFTSTDILACVKETNVIGMGATGVVYKAEVPQSNTVVAVKKLWRTGTDIEVGSSDDLVGEVNVLGRLRHRNIVRLLGFLHNDIDVMIVYEFMHNGNLGEALHGRQATRLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKTNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDSDFGESIDIVEWIRMKIRDNKSLEEALDPSVGNNRHVLEEMLLVLRIAILCTAKLPKDRPTMRDVVMMLGEAKPRRKSSGNSNDVANNKETPVFSTSPVNDNNLV 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01596 1019 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
Gma19g01596 1019 PRINTS Leucine-rich repeat signature 553 566 - -
Gma19g01596 1019 PRINTS Leucine-rich repeat signature 508 521 - -
Gma19g01596 1019 ProSitePatterns Protein kinases ATP-binding region signature. 713 737 IPR017441 GO:0005524
Gma19g01596 1019 Gene3D Ribonuclease Inhibitor 287 368 IPR032675 -
Gma19g01596 1019 PANTHER UNNAMED PRODUCT 11 995 - -
Gma19g01596 1019 SUPERFAMILY RNI-like 81 387 - -
Gma19g01596 1019 MobiDBLite consensus disorder prediction 993 1019 - -
Gma19g01596 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Gma19g01596 1019 SMART serkin_6 707 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01596 1019 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 995 - -
Gma19g01596 1019 Gene3D Ribonuclease Inhibitor 437 626 IPR032675 -
Gma19g01596 1019 Gene3D Ribonuclease Inhibitor 374 436 IPR032675 -
Gma19g01596 1019 SMART LRR_typ_2 433 457 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 505 529 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 244 268 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 196 220 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 340 364 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 553 577 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 292 316 IPR003591 -
Gma19g01596 1019 SMART LRR_typ_2 100 124 IPR003591 -
Gma19g01596 1019 MobiDBLite consensus disorder prediction 984 1019 - -
Gma19g01596 1019 Gene3D Ribonuclease Inhibitor 182 286 IPR032675 -
Gma19g01596 1019 Gene3D Phosphorylase Kinase; domain 1 707 791 - -
Gma19g01596 1019 Gene3D Transferase(Phosphotransferase) domain 1 792 1008 - -
Gma19g01596 1019 ProSiteProfiles Protein kinase domain profile. 707 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01596 1019 Pfam Protein kinase domain 709 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01596 1019 SUPERFAMILY Protein kinase-like (PK-like) 704 983 IPR011009 -
Gma19g01596 1019 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Gma19g01596 1019 Pfam Leucine rich repeat 175 232 IPR001611 GO:0005515
Gma19g01596 1019 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Gma19g01596 1019 SUPERFAMILY RNI-like 285 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01596 Gma-Chr19 45330646 45334101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01596 11 1013 Receptor kinase-like Gene Family AT1G08590 59.064 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma19g01596 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01596 - - gmx:100811284 1977.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01596 19 45330646 45334101 Gma19g01596 19 45330646 45334101 ECH
Gma19g01596 19 45330646 45334101 Gma03g01542 03 41657466 41660783 GST