Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01589 ATGGCGCCCAATCCAAGAGTGGTAGCGGCCTTTATGGCAATGTCGAATCTCGGGATTCATGAATCAAAAGTTAAACCAGTGTTGAAGAAACTGCTTAAATTGTATGATAAGAACTGGGCACTCATTGAAGAAGAGAGTTATAGGGCTCTGGCTGATGCTATATTTGAGGAGGAAGAAAATAAGCCTATGACTGCTGAAATGTGTTCTGGCTTTTCAAACATTCAGGACGGAGTAGTGGACGATGTAGAAGCTCATACGCATGAGGAACCTGTGCGGCCTTTGAAGAGGTTGCGTTTGAGAGGCCAAGAGGGTCAATCTTTGCGCCCTCTGACTAGCAGTGGCCCCAGCTCAGCTGCATTTCCATTGAAAATGCCTAAATTAGAAGACGGGACAGTGCCTGAGAGTAGTTCCAGACTGCAGCCTCAAAGCCTGGCTGCATTATCTGATGGAAATGCAAGGATTGGTGCTCATCATGTTCCCCCACAAGATGCTGTTGTCGACAAGGGAAAGAAACCTATATCACCTCAAGTTACTCCCAGAGGGAGAAGGTCCCTTTCTGAACCACTTAAAGAGTCAACAGTTGAAGGCCGAGCTGCTCTGTTGGCAAATAACAAAATGCCTCATCCATTTATTTTGATCAAGCCCAAGGATGAGCCTGTTGATGATATACCAGATTATGAGATTCCCCTTGCAGTGATTCCTCCTGACTCTCCAATGGGTGCAGTTGAAAAGCAAGATGTCCATGACACTGTTGTATCACAATGCAGAGATGAAGACGTTGAACATGAAGATGTTTTTCCTTCCTCAAATGAAGAAGCAACTTCTAATGTATATGTAGCTTTGTCATCTATGGGAGAGGAACAATCTGTAAAGATAACACAAACTGATGATGTTTCAAAGGAATCTGAGACCAATGACTCATCAATTGTCAGAGGAAATAAAGATTCAGTCATTGCAAATGGGTCAATCAGTGTTAAGTCTTCTTCGGCCGTGGCTGAACTTCAAGTTCCTAGTTCTATACCCAGCCCGAGTGATCCGGATGATGCTGTACTGGCTCCCAAGAAGGTCGCAATGAATGGTTTCTTACAAAGTGATGGTGGAAAGGAGCTGGAGGATCCTATATCCCCAAATTCATGTACTTTAGTGGTTGTTCAAAAACATCAGCTTACAACTGATGATGCAAGGGCAGTTCATGATGTTAATGACCTAACAAAGGGAGAAGAAAGAGTGAAAATTTCATGGGTGAATAACACCACTAATGATTTCCCACCACTCTTTCACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTATGTTAATATTTCTCTATCTCGTATTGGGAATGAGGATTGTTGTTCAACTTGTATGGGCAATTGTGTATTGTCATCTAATCCATGTTCTTGTACAAATAAAACTGGGGGTGAATTTGCTTACACTGCAAAAGGCCTACTAAAGGAAGAGTTCTTGGACGAGTGTATTGCCCTCAGCCGTGATCCTCAAAATTATTTCTATTGCAAAGCATGTCCCCTTGAAAGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGCTGTGGGAAACATTGTGGCAATCGGGTTGTCCAGCGTGGGATAACTTGCAAGTTGCAGGTGTTTTTGACTTCAGATGGAAAAGGGTGGGGTCTTCGTACCTTAGAAGATATTCCAAAAGGCGCATTTGTATGTGAGTTTGTTGGGGAAATTTTGACCCTCAAAGAGTTGCATGAGAGGAACCTGAAATATCCCAAAAATGGGAAATATACATACCCAATTTTATTGGATGCAGATTGGGGTTCAGGAACTGTGAAGGATAGAGAAGCTCTTTGCTTATATGCTGCATCATATGGAAATGCTGCTAGATTTATTAATCACAGATGTTTGGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGGCCCAACTCATCACTACTATCATTTTGCCTTCTTCACATCCAGAAAAGTAGCAGCACAGGAAGAGCTCACTTGGGATTATGGCATCAACTTTGATGAACATGATGATCAGCCAATTGAGCTGTTCCAGTGCAGATGTAGCAGTAAATTCTGTAGGAATATTAAGCGATTAAATAGATCCATGAGATCGTCAAGTTCATGA 2184 0.4217 MAPNPRVVAAFMAMSNLGIHESKVKPVLKKLLKLYDKNWALIEEESYRALADAIFEEEENKPMTAEMCSGFSNIQDGVVDDVEAHTHEEPVRPLKRLRLRGQEGQSLRPLTSSGPSSAAFPLKMPKLEDGTVPESSSRLQPQSLAALSDGNARIGAHHVPPQDAVVDKGKKPISPQVTPRGRRSLSEPLKESTVEGRAALLANNKMPHPFILIKPKDEPVDDIPDYEIPLAVIPPDSPMGAVEKQDVHDTVVSQCRDEDVEHEDVFPSSNEEATSNVYVALSSMGEEQSVKITQTDDVSKESETNDSSIVRGNKDSVIANGSISVKSSSAVAELQVPSSIPSPSDPDDAVLAPKKVAMNGFLQSDGGKELEDPISPNSCTLVVVQKHQLTTDDARAVHDVNDLTKGEERVKISWVNNTTNDFPPLFHYIPQNLVFRDAYVNISLSRIGNEDCCSTCMGNCVLSSNPCSCTNKTGGEFAYTAKGLLKEEFLDECIALSRDPQNYFYCKACPLERSKNDDCLEPCKGHLKRKFIKECWSKCGCGKHCGNRVVQRGITCKLQVFLTSDGKGWGLRTLEDIPKGAFVCEFVGEILTLKELHERNLKYPKNGKYTYPILLDADWGSGTVKDREALCLYAASYGNAARFINHRCLDANLVEIPVEVEGPTHHYYHFAFFTSRKVAAQEELTWDYGINFDEHDDQPIELFQCRCSSKFCRNIKRLNRSMRSSSS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01589 727 SUPERFAMILY SET domain 396 695 IPR046341 -
Gma19g01589 727 SMART set_7 556 695 IPR001214 GO:0005515
Gma19g01589 727 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
Gma19g01589 727 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 727 - -
Gma19g01589 727 ProSiteProfiles SET domain profile. 556 689 IPR001214 GO:0005515
Gma19g01589 727 Gene3D SET domain 380 699 IPR046341 -
Gma19g01589 727 Gene3D - 1 60 IPR043017 -
Gma19g01589 727 MobiDBLite consensus disorder prediction 86 141 - -
Gma19g01589 727 CDD SET_SETDB-like 424 689 - -
Gma19g01589 727 Pfam SET domain 568 689 IPR001214 GO:0005515
Gma19g01589 727 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 727 - -
Gma19g01589 727 Pfam Pre-SET motif 404 548 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma19g01589 727 MobiDBLite consensus disorder prediction 86 102 - -
Gma19g01589 727 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 723 IPR025776 -
Gma19g01589 727 SMART preset_2 400 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma19g01589 727 MobiDBLite consensus disorder prediction 293 308 - -
Gma19g01589 727 MobiDBLite consensus disorder prediction 289 308 - -
Gma19g01589 727 MobiDBLite consensus disorder prediction 153 191 - -
Gma19g01589 727 ProSiteProfiles Pre-SET domain profile. 452 553 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01589 Gma-Chr19 45272266 45279277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01589 532 715 C2H2 Transcription Factor Family AT2G23740 38.624 7.38e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma19g01589 Pre-SET 4.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01589 - - gmx:100809678 1427.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01589 19 45272266 45279277 Gma19g01589 19 45272266 45279277 ECH
Gma19g01589 19 45272266 45279277 Gma03g01534 03 41595357 41602416 GST
Gma10g00376 10 3573689 3579532 Gma19g01589 19 45272266 45279277 PCT
Gma13g01073 13 24886508 24891815 Gma19g01589 19 45272266 45279277 PCT