Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01585 ATGGGGATGTCTGAAGCATTTCCCTCATCATTGCCTGCCCTTCCATCGCCTCTAGAAGAGACATACCCTAAATTATCTGATTCTAAACCAGTTTTTATGGAAAAAGAGCTTAAAACAAAACCTTATACACATTCAAGTCATTTAACTTCCAGCGGAGCAGTTGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCATCCTTTTCATCTCATGAAAAACAACCTAGAAATACTCATTTTATTTCACAGTCATTAAGTAACATGGCTTCATTGCCATTATCTTATTCTTCAAATAGTGAACCGATACCTTCTACAACATCAACCCCTTATTCCAATGGAAACAGTGTTTCCTGGCATACAGATTCCTTGCCTAGCTTTCTCGATTTCCCTGCCAATACCTCCATTGGTAATAGTCAAGTAGAAAGCAGTGACTGCAATATCATGGCAACTGAAGAGTATTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAATTAATCAGTGATGTTGATCCTTTGACTTCTAATTGGAATGATCTTCTTGCTGACAACATTCAAGATCTTGAACCAAAGGTCGCAAAATCATCTTCTCAACTTCCAATAGGACACCAATCCCAAAGCCATCAACAACTTCCTGCTTCATCTGGAGAAAATCGTGTTGGTGTTGCCCCAACTTCCTCAACAAATTCTGCACCTGCCAAGCCACGGATGCGCTGGACACCTGAGCTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAAGGTGTGCTGAAGCTCATGAAAGTTGATGGATTAACTATATACCATGTTAAAAGCCACCTACAGAAGTACAGGACAGCTAGATATAGACCTGAGTCATCTGAAGGAGCTGCAGAGAAAAAACTAAGTCCAATTGAAGAGATGTCATCTCTGGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGAGGCTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTTCAAATGATGTTTGAGAAGCAGTGCAAACCTGGCATTGAAACATTTAAGGCATCATCGTCTGCCATCGAAAGTCAATCTGGAGTGTCTTCTGATGCCATCAAAGATTCTCCAGCCAAAACAGAATCAGAAACCATCAAGGTGGACCATTGCAAGTCAGGAGCTGATCAGGCTAATGGCATTACCACAGTTGAGGAAAGCGCATTGGAAGTGGGTGAGAAGCAGGATGCTCCTGAAAGTCAAGCTTCTGAGAATCCTGAGCAACATGCTAGTGAAGATAGTGCTAAAGCCTCAAAGCGTCCAAGGACAGAGGAGTAA 1398 0.4242 MGMSEAFPSSLPALPSPLEETYPKLSDSKPVFMEKELKTKPYTHSSHLTSSGAVGHMFSSSPGYSTDLHHSSFSSHEKQPRNTHFISQSLSNMASLPLSYSSNSEPIPSTTSTPYSNGNSVSWHTDSLPSFLDFPANTSIGNSQVESSDCNIMATEEYSKRNDWQEWADQLISDVDPLTSNWNDLLADNIQDLEPKVAKSSSQLPIGHQSQSHQQLPASSGENRVGVAPTSSTNSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVDGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETFKASSSAIESQSGVSSDAIKDSPAKTESETIKVDHCKSGADQANGITTVEESALEVGEKQDAPESQASENPEQHASEDSAKASKRPRTEE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01585 465 MobiDBLite consensus disorder prediction 196 241 - -
Gma19g01585 465 MobiDBLite consensus disorder prediction 1 25 - -
Gma19g01585 465 Coils Coil 327 347 - -
Gma19g01585 465 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 465 IPR044848 GO:0003700
Gma19g01585 465 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 9 465 - -
Gma19g01585 465 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 239 293 IPR006447 GO:0003677
Gma19g01585 465 MobiDBLite consensus disorder prediction 449 465 - -
Gma19g01585 465 SUPERFAMILY Homeodomain-like 237 293 IPR009057 -
Gma19g01585 465 MobiDBLite consensus disorder prediction 382 465 - -
Gma19g01585 465 MobiDBLite consensus disorder prediction 382 396 - -
Gma19g01585 465 MobiDBLite consensus disorder prediction 397 411 - -
Gma19g01585 465 Pfam Myb-like DNA-binding domain 241 292 IPR001005 -
Gma19g01585 465 Gene3D - 238 297 - -
Gma19g01585 465 MobiDBLite consensus disorder prediction 196 239 - -
Gma19g01585 465 Pfam MYB-CC type transfactor, LHEQLE motif 324 370 IPR025756 -
Gma19g01585 465 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 236 296 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01585 Gma-Chr19 45250634 45255910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01585 9 413 G2-like Transcription Factor Family AT4G28610 51.079 7.33e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma19g01585 Myb_DNA-binding 8.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01585 - - gmx:100810560 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01585 19 45250634 45255910 Gma19g01585 19 45250634 45255910 ECH
Gma03g01530 03 41572547 41576808 Gma19g01585 19 45250634 45255910 ECH
Gma19g01585 19 45250634 45255910 Gma03g01530 03 41572547 41576808 GST
Gma19g01585 19 45250634 45255910 Gma10g00372 10 3548067 3554404 PCT
Gma19g01585 19 45250634 45255910 Gma13g01069 13 24858690 24863146 PCT
Gma10g00372 10 3548067 3554404 Gma19g01585 19 45250634 45255910 PCT
Gma13g01069 13 24858690 24863146 Gma19g01585 19 45250634 45255910 PCT