Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01576 ATGGGGAGTAGGGCTAGGCAGGGGAGGAGATTGCAGACGATGATGAAGTGCATGTGCCTGAGGGAGCCGTTGAAGGGAGAAGATGAAACGGTTCCTTCTTCTGATTCTCTTGCAATCAGGGAATTCTATTCTTCAACGGCAAGTGGGCGTTCTGGCCCCGACGGAGAAATTGAGATGATGGGGTCGGGTTCTGGGAACATGGATGAAGCCGAATTGTCCTTGCGTGAGAGTGGCATCATGGACATCATGGACAATGAGGAAGCAAGAGCTTTGTTAGGAAAAGATGAATATCAGGAAGGAAATATAGAAGCTGCTTTACATGTTTATGAGAGGATAAATATAAGTGCTGTGACTTCCAAGATGAAAATTTCCCTTGCCAAAAGCAGAGAACACCGTAAGAAACATTACCATTATTATGCTACTCCTCCGATGTCCATATACACGGCTGGATTACTGTTGGAAGCAATTTTCCTAAAAGCAAAATGTTTGCAGGTTCTGGGGAGGTTTAAAGAAGCTGCCCAAACTTGTAAAGTTATTCTGGACATAGTTGAGTCTTCTTTACCTGAAGGCTTGCCTCAAAACTTCGGTGATGAGGGTAAATTGCAGGAGACTTTGAGTAAGGTAGTTGAGCTACTTCCAGAATTGTGGAAACTTGCTGATTCTCCCCGTGATGTTATTTTGTCTTACCGTCGTGCACTCCTTCACCGACGGAATCTTGATGCAAAAACCATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTATATAGTGGAGGGGAAGCAATCCTTTCAAATCTTCGTTCCCATATGGACAGCTCGTTTGTACCCAGAAACAACTTAGAAGAGGCTATTCTTCTTTTAATGATTTTGCTGAGAAAAATATCTCTAAATAAAATTGAATGGGATCCGTCAATTTTGGACCACCTTTCGTTTGCTCTATCTGTTTCAGGGGATTTGACAGCTTTAGCCCATCAATGGGAAGAATTACTCCCTGGGACTATCAATCGAAGAGAAAGATACCATGCCTTATCTCTTTGTTATTATGGTGCAGGTAATGACTTGGTAGCACTGAATCTTCTTAGGAAATTGCTGAGTAGTAGAGAGGACCCAAAACATGTTCCTTCTTTGTTAATGGCTTCTAAGATTTGTAGCATGAACCCTGATCTTGCAAAAGATGGGGCAAGCTTAGCTTGCAAGGTGCTTGAGAACTTGGATGGAAGATGTGATCAGTTGGAAAGTCTTTCCAGTTGCTTACTTGGTGTTTCACTTTCAGCACACTCAAAAATTGCTATTTCTAATTCTGAGAGGGTTGAGAAACAATCTGAGGCACTTCATTCTCTGGAAACTGCAAGCAAAGTGACCAGAATGAGGAATCCCCCTGTAATATACTACTTGAGCTTAGAATGTGCAGAGCAAAGGAAGTTGGATGTTGCACTTCATTATGCAAAATGCTTTCTAAACTTGGAAGCTGGGTCTAATATTAAAGGGTGGTTATTGTTAGCCCGGATATTATCAGCTCAAAAACAGTTTTTGGATGCTGAATCTATTGTCGATGAAGCTTTGAACCAGACTGGAATATGGGATCAAGGAGAGTTACTGCGAACAAAAGCTAAACTACAAATTGCACAGGGCCAATTGAAGAGTGCCATTGAAACCTATACTCAGCTTCTTGCTATTCTCCTAGTTCAGAGAAAAACTTTTGGTTCAAAGAAGAAGCTGTATAAGGACTACATAGATCATGCTAGGAACATGGAAGTGGAAATATGGCATGATCTTGCTTATGTGTACATAAGTCTGTCACGGTGGCATGATGCAGAGGTGTGTCTTTCGAAATCTAAAGCCATCAAACTATACTCTGCTTCTAGATGTCATGCAATAGGTACAATGTACGAAGCAAAGGGCCTTTACAAAGAGGCTATAAAAGCTTTTCGCGATGCTTTGAGCATTGATCCCGGACATGTTCCTAGCTTGATCTCTACTGCTGTGGTTCTTAGACGGTGCAGTAATCAATCAAATCCTGCTATCAGAAGCTTTCTGATGGATGCACTACGGCATGACAGATTTAATGCTTCTGCTTGGTATAATCTTGGCATTTTTAACAAGGATGAGGGTACAATTCTAGAAGCTGCAGACTGTTTTGAGACAGCAAACTTTCTTGAAGAATCGGCACCAGTTGAACCTTTCAGATGA 2193 0.415 MGSRARQGRRLQTMMKCMCLREPLKGEDETVPSSDSLAIREFYSSTASGRSGPDGEIEMMGSGSGNMDEAELSLRESGIMDIMDNEEARALLGKDEYQEGNIEAALHVYERINISAVTSKMKISLAKSREHRKKHYHYYATPPMSIYTAGLLLEAIFLKAKCLQVLGRFKEAAQTCKVILDIVESSLPEGLPQNFGDEGKLQETLSKVVELLPELWKLADSPRDVILSYRRALLHRRNLDAKTIAKIQKEFVVFLLYSGGEAILSNLRSHMDSSFVPRNNLEEAILLLMILLRKISLNKIEWDPSILDHLSFALSVSGDLTALAHQWEELLPGTINRRERYHALSLCYYGAGNDLVALNLLRKLLSSREDPKHVPSLLMASKICSMNPDLAKDGASLACKVLENLDGRCDQLESLSSCLLGVSLSAHSKIAISNSERVEKQSEALHSLETASKVTRMRNPPVIYYLSLECAEQRKLDVALHYAKCFLNLEAGSNIKGWLLLARILSAQKQFLDAESIVDEALNQTGIWDQGELLRTKAKLQIAQGQLKSAIETYTQLLAILLVQRKTFGSKKKLYKDYIDHARNMEVEIWHDLAYVYISLSRWHDAEVCLSKSKAIKLYSASRCHAIGTMYEAKGLYKEAIKAFRDALSIDPGHVPSLISTAVVLRRCSNQSNPAIRSFLMDALRHDRFNASAWYNLGIFNKDEGTILEAADCFETANFLEESAPVEPFR 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01576 730 Gene3D Tetratricopeptide repeat domain 63 447 IPR011990 GO:0005515
Gma19g01576 730 SMART tpr_5 495 528 IPR019734 GO:0005515
Gma19g01576 730 SMART tpr_5 691 724 IPR019734 GO:0005515
Gma19g01576 730 SMART tpr_5 621 654 IPR019734 GO:0005515
Gma19g01576 730 SMART tpr_5 153 186 IPR019734 GO:0005515
Gma19g01576 730 SMART tpr_5 531 564 IPR019734 GO:0005515
Gma19g01576 730 SMART tpr_5 587 620 IPR019734 GO:0005515
Gma19g01576 730 SUPERFAMILY TPR-like 439 560 IPR011990 GO:0005515
Gma19g01576 730 Gene3D Tetratricopeptide repeat domain 448 725 IPR011990 GO:0005515
Gma19g01576 730 ProSiteProfiles TPR repeat profile. 621 654 IPR019734 GO:0005515
Gma19g01576 730 SUPERFAMILY TPR-like 153 372 IPR011990 GO:0005515
Gma19g01576 730 MobiDBLite consensus disorder prediction 44 68 - -
Gma19g01576 730 PANTHER PROTEIN NPG1 7 730 IPR043376 -
Gma19g01576 730 SUPERFAMILY TPR-like 532 717 IPR011990 GO:0005515
Gma19g01576 730 Pfam Tetratricopeptide repeat 622 653 IPR019734 GO:0005515
Gma19g01576 730 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 7 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01576 Gma-Chr19 45169959 45175296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01576 15 730 Calmodulin-binding Proteins AT4G28600 54.658 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01576 K21843 - gmx:100809498 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01576 19 45169959 45175296 Gma19g01576 19 45169959 45175296 ECH
Gma19g01576 19 45169959 45175296 Gma03g01523 03 41470344 41475816 GST
Gma19g01576 19 45169959 45175296 Gma10g00366 10 3514119 3519863 PCT
Gma19g01576 19 45169959 45175296 Gma13g01064 13 24804044 24808909 PCT