Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01570 ATGGATTCTGCAAGGAGTTGGTTACAGAAATTTCAACCACGTGATAAATTGAGGGCTTCTACAAGGAAGAATGATGATACTAATGGTGAAGATGAAATTCCAAATATGTCTATGGATGAAGCAACTCTTTCCAATATCACAAAACAAAAGGTTGCAGCTGCTAAACAATACATTGAGAACCACTACAAGGAACAAATGAAAAGCCTTCAAGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGACGCTGATGTCTCTGAGGAAGATCAAAATAACCTACTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGTCTTCAAAGGCACAAAATGGGTGTCGACGATTTTGAGTTATTAACTATGATTGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGTAGGGAAAAGACTACAGATCATGTATATGCAATGAAAAAGTTAAAGAAATCAGAAATGCTTCGTAGAGGCCAGGTAGAACATGTTAGAGCTGAAAGGAATCTTCTGGCAGAGGTTGACAACAATTGCATAGTTAAACTTTATTGTTCTTTTCAAGATGACGAATATTTGTATCTTATTATGGAATATCTACCGGGTGGGGATATGATGACTCTACTCATGAGAAAGGATATCTTGACTGAAGATGAAACCCGATTTTATGTGGGGGAAACAGTTTTAGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATTAAGCCTGACAACTTGTTACTTGATAGATATGGACACTTAAGACTGTCAGATTTTGGACTATGTAAACCATTAGATTGTAGTACACTTGAAGAAGCAGATTTTTCTACGAGTCAAAATGCTAATGGATCTACACGAAATGATGAACATGCAACTCCAAAACGCACACAACAAGAACAATTGCAAAATTGGCAGAAAAATAGAAGGACACTCGCGTATTCTACGGTTGGTACACCGGATTATATTGCTCCAGAAGTTCTAATGAAAAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTAGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAATTGGAAATCTCACTTAAAATTTCCTGAAGAAGTAAGGTTATCTCCAGAGGCCAAAGATCTTATAAGTAAGCTTTTGTGTAATGTTAATCAAAGGTTGGGCTCAAATGGTGCAGATGAAATAAAGGCTCATCAATTCTTTAATGGTGTGGAATGGGATAAATTGTATCAAATGGAAGCTGCCTTTATTCCTGAGGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACAGTCAATCTCATTCATCGTCAAGAATTGGTCCATGGAGGAAGATGATTTCTTCTAAAGACTTTAATTTTGTCGGATACACATACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGAATGGCTGAATTAAGGAAGAAAACATCAAAGACAAAAAAACCATCCATCAAATCCTTATTTGATTGTGAGAGTGAGGCATCTGAGGCTTCAGATTCAACAACAAGCATAACTACGAAGTATGATGATCTACCTCCTCAACCAAAATAG 1629 0.3622 MDSARSWLQKFQPRDKLRASTRKNDDTNGEDEIPNMSMDEATLSNITKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDNNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLEEADFSTSQNANGSTRNDEHATPKRTQQEQLQNWQKNRRTLAYSTVGTPDYIAPEVLMKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEVRLSPEAKDLISKLLCNVNQRLGSNGADEIKAHQFFNGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEESDSQSHSSSRIGPWRKMISSKDFNFVGYTYKNFEIVNDYQVPGMAELRKKTSKTKKPSIKSLFDCESEASEASDSTTSITTKYDDLPPQPK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01570 542 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01570 542 MobiDBLite consensus disorder prediction 519 535 - -
Gma19g01570 542 MobiDBLite consensus disorder prediction 279 306 - -
Gma19g01570 542 MobiDBLite consensus disorder prediction 1 35 - -
Gma19g01570 542 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma19g01570 542 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gma19g01570 542 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01570 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Gma19g01570 542 SUPERFAMILY Protein kinase-like (PK-like) 93 472 IPR011009 -
Gma19g01570 542 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 529 - -
Gma19g01570 542 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01570 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 529 - -
Gma19g01570 542 Gene3D Phosphorylase Kinase; domain 1 118 447 - -
Gma19g01570 542 MobiDBLite consensus disorder prediction 9 30 - -
Gma19g01570 542 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Gma19g01570 542 MobiDBLite consensus disorder prediction 517 542 - -
Gma19g01570 542 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma19g01570 542 CDD STKc_NDR_like 118 482 - -
Gma19g01570 542 Gene3D Transferase(Phosphotransferase) domain 1 204 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01570 Gma-Chr19 45103685 45110809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01570 1 517 AGC Kinase Gene Family AT2G20470 77.629 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gma19g01570 Pkinase 2.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01570 K08790 - gmx:100805940 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01570 19 45103685 45110809 Gma19g01570 19 45103685 45110809 ECH
Gma19g01570 19 45103685 45110809 Gma03g01514 03 41405837 41409859 GST
Gma19g01570 19 45103685 45110809 Gma10g00055 10 568506 582347 PCT
Gma10g00358 10 3437585 3445144 Gma19g01570 19 45103685 45110809 PCT
Gma13g01056 13 24727315 24734363 Gma19g01570 19 45103685 45110809 PCT