Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01548 ATGAGTTCCCCTTTCTTTCAGCATGCAGATTGGGGCATGTTGAAGGAGCCTAATTCGGATATTTTGTTTGAATCATTTTCAAGCAAAGGAGTTGATCATGACCCTTTCCATGATTGTCTTTCCTTTGATATGATTGATAACTCAAGGGATCCACAGGAAGAAAGTCATCATCAAGTGATTGAAGAAGCTATGaaaacaaagaagaagtcttatattggggctgcATTTTCCATGAGAGGCTCTAGTGCAGTGCTGAATTTTCCGGTCAAAAGGGTCAAAGAGTCTTTACAAGAGATGAACTATTCTGGTTGCAGCCGAGGGTGCTCTCCTGCATTAGAACTCAAAGAGAGGCACAACATAAGAAGAAAATTGTCGTCATCATCAAAGGCTAAGACAAGTAAAAGGAAACAGGACTTGGAGGAATCCAGTGTTGTGGTGCTGGAGGACTTAGGAGCTGATTATCTGGAGGCACTTCTTAGCACATCGGCGGATCaaagtgcaacaagctctacctgctaa 519 0.3796 MSSPFFQHADWGMLKEPNSDILFESFSSKGVDHDPFHDCLSFDMIDNSRDPQEESHHQVIEEAMKTKKKSYIGAAFSMRGSSAVLNFPVKRVKESLQEMNYSGCSRGCSPALELKERHNIRRKLSSSSKAKTSKRKQDLEESSVVVLEDLGADYLEALLSTSADQSATSSTC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01548 172 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 71 163 - -
Gma19g01548 172 PANTHER DNA-BINDING DOMAIN 71 163 IPR044808 GO:0003700|GO:0009873
Gma19g01548 172 MobiDBLite consensus disorder prediction 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01548 Gma-Chr19 44850314 44850952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01548 70 162 AP2-EREBP Transcription Factor Family AT3G23240 46.237 2.37e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01548 K14516 - gmx:100800600 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01548 19 44850314 44850952 Gma10g00341 10 3202569 3203231 PCT
Gma19g01548 19 44850314 44850952 Gma13g01028 13 24430862 24431446 PCT
Gma10g00341 10 3202569 3203231 Gma19g01548 19 44850314 44850952 PCT
Gma13g01028 13 24430862 24431446 Gma19g01548 19 44850314 44850952 PCT