Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01547 ATGGAGGATTTAAAGGAAAAGGTCAATGAAGGGGAACCAACGCAAATTAAGTATAGAGGAGTACGTAGGAGACCATGGGGAAAATTTGCTGCAGAAATTAGAGATTCAGCTAGACATGGTGCTCGTgtgtggctcgggacatttaacactgctgaggaggccgcaagagcttatgatcgtgctgcctTTGAGATGAGAGGTGCTACGGCCATTCTCAACTTCCCAGATGAACACCCTCCTTGCAATGTGACTTCTCTTAGCAAGAAGTCCTCATCATCTAACACTGAGATTGGTAAACAAGTTGTGGTATTTGAGTGCTTGGATGACAAATTGTTAGAGGAACTCCTTGATTGTGATGGGGAAAACCATCAATGA 375 0.3547 MEDLKEKVNEGEPTQIKYRGVRRRPWGKFAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGATAILNFPDEHPPCNVTSLSKKSSSSNTEIGKQVVVFECLDDKLLEELLDCDGENHQ 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01547 124 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Gma19g01547 124 PANTHER DNA-BINDING DOMAIN 8 89 IPR044808 GO:0003700|GO:0009873
Gma19g01547 124 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Gma19g01547 124 Gene3D AP2/ERF domain 16 76 IPR036955 GO:0003700|GO:0006355
Gma19g01547 124 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 8 89 - -
Gma19g01547 124 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Gma19g01547 124 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Gma19g01547 124 Pfam AP2 domain 17 67 IPR001471 GO:0003700|GO:0006355
Gma19g01547 124 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Gma19g01547 124 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01547 Gma-Chr19 44837261 44837870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01547 15 119 AP2-EREBP Transcription Factor Family AT3G23230 59.664 5.16e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma19g01547 AP2 1.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01547 - - gmx:100800069 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01547 19 44837261 44837870 Gma19g01547 19 44837261 44837870 ECH
Gma19g01547 19 44837261 44837870 Gma03g01493 03 41168542 41168980 GST
Gma10g00340 10 3195193 3195772 Gma19g01547 19 44837261 44837870 PCT
Gma13g01024 13 24361605 24362279 Gma19g01547 19 44837261 44837870 PCT