Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01543 ATGGGTACCAACTTGCACCAAGTACTCGGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGATGCATATTATAACAATCCTGATGATTTCGACTCTTCAGAAAATAAACACTGCCAGAAGACCTTGGAACAGATTGGTTGTGGGAAATTTTCACACAGTGCATTAGGGTTAGCGGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGtattgttggacaggtagctgttactggaaaacataggtggatctgtgcagataatcaagttgcgagttctggcttgtcttttgagTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGTCCCTCTTGGTGTTGTTCAGCTTGGCTCTCTAAATAAAGTGATTGAAGATATGGGGTTTGTAACTCATATCAGAAATCTTTTTTTGTCTACTCAAAATTACTCAATCCAATGTCCTAGTCAAATACAGGGTAGTTTGAAGAGTTCATCTCAGCTGGACAAATCGAAGGAAAATTTTTCTTCAGATATTATGCGTACTTGCTTTTACGATACACAGAAATCTATGAAAAGTGAAACAGCAGATGTTTTAATGCCCCTTCAATGTTCTGGGACTGGGAGGAACTGTACACCTCCTTCTGCTTGTGAGAAAATGTCTGATAATGTGGCCAAGCAAGAGGGGCCTGAATTGTACAATGATGAAAGTTCCATTTTGCTTCAGTCGATATCCAATATGATGAATGTGGACTGTCAGGAATTTGAAGAGATGAAACCTCTATATGGGACAAAGTATGAAGGAGGAAGTAGTGGCTGCAAAGATATGAGATTGGAATCAGAAAAAAATGTCTCATCATTTTTAAATGATTTTGTTACAGATAATGCTAGCTTCAATGATGTAATATGTCCATCAGAAAAAGTCAGAGTTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATACAGTTGTTTGTGAAAGTGATAAATTGCATTATGCAGATATTAACCAAAAAGGGGCAGTGAATTTTGCCCAACCTTCAGAAGCAAACTCCCAGCAACATATTGAAAAGTCAAAGTTTCATACTGAGCCTTGTTACAAGGATATCCCAGACTTCCAAACTGAACCTTGTTACAAGGATGCCTCACACATATTGAAGTTCCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCAGCTTTTTTGAAAGGGGGTAAATGTTTAGATTGGCCAGCACAGATTAATCAAGAAATGAAATCTGTTGAAATGTCAGATGAGATTAGCACTAGTCAATTGACTTCTGAATCTTGTCCAGAACATCTTTTAGAAGCAATGCTGGCCAACTTTAGCCATAGTAATAATGATGTTAATAGTGAATTATCATTTTGTAAATCAAAGCAATCTGCAATTGTCTCTGCAAAAAATCATGAGGCTTCTATTCACAATGTGCATACTATTAATTCAGAAGGCTATTCGATAGATCAGCTCTCTCTTGTCAGAGAGGACAAACACCATTCTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCCTCAAAAGGTATTTCATCTACATTTCATAGTTCAAATAGTGGACAGCTTGAAAGGTCGTCTGAACCATCTAAGAACAGCAAAAAAAGGGCCAGGCCAGGGGAAAGTTGTAGGCCTCGGCCAAGGGACAGGCAACTGATCCAAGATCGTATCAAAGAGTTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTCCTGGAGCGCACAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGTTAACTGACTTTTCTGATACGAAGTCAAAGTTGCATCATAAGGAAGCAGACATTCTTGGATCATCTAGTTATGAGCAGGGCTCAAGCTGGGCCATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGatgctatgtgaggagtgcaaccattttcttgaaatagcagaagccataagaagtttgggccttaccattttgaagggtgcaacaaaagctcatggtgaaaagatgtggatatgctttgttgtcgagGGTCAAAACAAGAGAAATGTACACAGATTGGATATCCTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACCGTGTATTCACATTAA 2271 0.3615 MGTNLHQVLGSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDFDSSENKHCQKTLEQIGCGKFSHSALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVASSGLSFEFADGWQSQFSAGIRTIAVVAVVPLGVVQLGSLNKVIEDMGFVTHIRNLFLSTQNYSIQCPSQIQGSLKSSSQLDKSKENFSSDIMRTCFYDTQKSMKSETADVLMPLQCSGTGRNCTPPSACEKMSDNVAKQEGPELYNDESSILLQSISNMMNVDCQEFEEMKPLYGTKYEGGSSGCKDMRLESEKNVSSFLNDFVTDNASFNDVICPSEKVRVDSACFPSVFLDTVVCESDKLHYADINQKGAVNFAQPSEANSQQHIEKSKFHTEPCYKDIPDFQTEPCYKDASHILKFPAGCELHEALGPAFLKGGKCLDWPAQINQEMKSVEMSDEISTSQLTSESCPEHLLEAMLANFSHSNNDVNSELSFCKSKQSAIVSAKNHEASIHNVHTINSEGYSIDQLSLVREDKHHSLSSSSGICGVMSSKGISSTFHSSNSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLTDFSDTKSKLHHKEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECNHFLEIAEAIRSLGLTILKGATKAHGEKMWICFVVEGQNKRNVHRLDILWPLVQILQSKSTVYSH 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01543 756 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 570 619 IPR011598 GO:0046983
Gma19g01543 756 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Gma19g01543 756 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 756 - -
Gma19g01543 756 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 756 IPR043561 GO:0003700|GO:0006355
Gma19g01543 756 MobiDBLite consensus disorder prediction 546 560 - -
Gma19g01543 756 MobiDBLite consensus disorder prediction 561 585 - -
Gma19g01543 756 MobiDBLite consensus disorder prediction 546 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01543 Gma-Chr19 44789727 44797106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01543 1 751 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.723 4.69e-153 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01543 - - gmx:100798490 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01543 19 44789727 44797106 Gma19g01543 19 44789727 44797106 ECH
Gma19g01543 19 44789727 44797106 Gma03g01489 03 41128396 41136835 GST
Gma19g01543 19 44789727 44797106 Gma10g00333 10 3131176 3137731 PCT
Gma10g00333 10 3131176 3137731 Gma19g01543 19 44789727 44797106 PCT