Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01537 ATGGACTTAAACTACCCAGAAGAGTGCTACTCCAAGAGCTCCTGCGAAGAAACCAACGATGATATGGGAATTGGAAGATCCTATGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCACAAGCCTTAGGTGGACACATGAACATACACAGAAAAGAAAGAGCCAACAAGACCAAAGCCAGTTTCTCTTCTCATCCTTCAAGTTCAAACAACGTTGATGGCATCAACAACTATGCAGATCTCGGGTTCTATTCACAGATTCCAAGCCTCTCCACTGCTCCTGATGCTAATAGCTACCGTGAAGTTTTCTTTCCTACCGCTGCACCAAGTGTTATTAGGCCTTCTTCCCATGAGGTTTTGTGTGTAGAAAACCAACGGGGTCATCACGTTTTTGAGCAAGATTGGAGGAAGAGAAATTTGAGCTTGTACACTAATCCGTTGGGTTTTCATGAAATTAAAGATAAGTTTGAAGAGAGTGAAGACAATGGCCTGGATTTGGAGCTGAGGCTTGGTCATCATCCATAG 525 0.4381 MDLNYPEECYSKSSCEETNDDMGIGRSYECIFCKRGFTTAQALGGHMNIHRKERANKTKASFSSHPSSSNNVDGINNYADLGFYSQIPSLSTAPDANSYREVFFPTAAPSVIRPSSHEVLCVENQRGHHVFEQDWRKRNLSLYTNPLGFHEIKDKFEESEDNGLDLELRLGHHP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01537 174 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Gma19g01537 174 Gene3D Classic Zinc Finger 13 78 - -
Gma19g01537 174 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 14 174 - -
Gma19g01537 174 PANTHER OS07G0101800 PROTEIN 14 174 - -
Gma19g01537 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Gma19g01537 174 Pfam C2H2-type zinc finger 28 53 - -
Gma19g01537 174 SUPERFAMILY beta-beta-alpha zinc fingers 26 55 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01537 Gma-Chr19 44722502 44723026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01537 28 99 C2H2 Transcription Factor Family AT5G43540 47.222 2.41e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01537 - - gmx:102664910 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01537 19 44722502 44723026 Gma19g01537 19 44722502 44723026 ECH
Gma19g01537 19 44722502 44723026 Gma03g01481 03 41052299 41052835 GST
Gma19g01537 19 44722502 44723026 Gma10g00325 10 3061191 3061674 PCT
Gma19g01537 19 44722502 44723026 Gma13g01009 13 24220657 24221238 PCT
Gma10g00325 10 3061191 3061674 Gma19g01537 19 44722502 44723026 PCT
Gma13g01009 13 24220657 24221238 Gma19g01537 19 44722502 44723026 PCT