Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01517 ATGGAGTCCCACGGCGGAGGACCCCTCCGTTCCCGCAGCTCCCAGTCCCCTTCTCCCTCCCACTCCGCCTCCGCCTCCGCCACCTCCTCCATCCACAAGCGCAAGCTCGCGTCTGAGGACCACGCGCCTCCCTTCCCTCCGTCCTCCTTCTCCGCCGACACCCGCGACGGCGCCCTCACCTCCAACGACGACCTCGAGAGCATCTCCGCCCGcggcgccgactccgactccgacgatgactccgaggacgccgtcgtcgacgacgacgaggacgactacggcaacgacaacgacTCCTCCATTCGGACCTTCACCGCCTCCAGGCTCAGCAACCCTCCCTCCGCTCCCCGCAACACCAAGCTCAAGACCGAAATCTCCACCGTCAAAATTGAGAATTCTGACGGCGCCAAAGACGCCGTAGTCGGAGCTTGTGCCGCCGCTTCCGCGGGATCGGTCCCCGGGATTGTGGTTAAGGAGGACCCGACTAAGATTTTTACTGATAATTTGCAAACGAGTGGGGCTTACACTGCCAGGGAAGAGAGTCTCAAGAAAGAGGAGGAAGCAGGAAGGCTCAAATTTGTATGCCTATCAAACGATGGTGTTGATGAGCATATGGTTTGGTATGCGTTGATTGGATTGAAGAATATATTTGCTAGGCAGCTTCCCAATATGCCCAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCTAGTCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAATATGCACGGGATATGGATGGGCTGACACATTTTCTCACATACGCTGACAATAATGCTGTTGGCTATTTTATCAAGCAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAACTCCCGTACACTGATTTGTCAACTATGATCCGTCGTCAAAGGCAGGCAATTGATGAAAAAATCAGAGAGCTATCAAACTGTCACATCGTTTATGCTGGAATTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAAATTATTGATGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAACTTTAAATGTTTCTACTGACAATGCTACTAATCAGAAACATTTGAATGGGTTTATGCGTTCACTTCTAAAGTCAATGTTCGATCATGCTGATGCTTGGCCATTCAAGGAGCCAGTTGATGCTCGGGATGTCCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCTAAGAGGGTGGATTCAGAGCAATATTATGTAACATTTGAGATGTTTGTTGCGGATGCCAGAAGAATGTTTGCGAATGCACGCACCTATAATTCTCCAGAAACCATTTATTACAAATGTTCTACAAGGCATGTGCTCGTGCTTCCACCTCCTGGATGGATGTTAGAAGCCCACTTTCAAAGCAAAGTGCAAGCGGGCCTCCAGCCTGGTACCAAAATTCAGTAG 1662 0.4489 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKLASEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEDDYGNDNDSSIRTFTASRLSNPPSAPRNTKLKTEISTVKIENSDGAKDAVVGACAAASAGSVPGIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCLSNDGVDEHMVWYALIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDMDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRTLNVSTDNATNQKHLNGFMRSLLKSMFDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVDSEQYYVTFEMFVADARRMFANARTYNSPETIYYKCSTRHVLVLPPPGWMLEAHFQSKVQAGLQPGTKIQ 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01517 553 MobiDBLite consensus disorder prediction 98 120 - -
Gma19g01517 553 Pfam Bromodomain 439 521 IPR001487 GO:0005515
Gma19g01517 553 ProSiteProfiles Bromodomain profile. 446 517 IPR001487 GO:0005515
Gma19g01517 553 Gene3D - 419 527 IPR036427 GO:0005515
Gma19g01517 553 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 200 347 IPR000182 GO:0016407
Gma19g01517 553 SMART bromo_6 427 547 IPR001487 GO:0005515
Gma19g01517 553 MobiDBLite consensus disorder prediction 53 68 - -
Gma19g01517 553 MobiDBLite consensus disorder prediction 8 32 - -
Gma19g01517 553 PANTHER BNAC04G26160D PROTEIN 3 553 - -
Gma19g01517 553 MobiDBLite consensus disorder prediction 76 95 - -
Gma19g01517 553 SUPERFAMILY Bromodomain 422 521 IPR036427 GO:0005515
Gma19g01517 553 MobiDBLite consensus disorder prediction 1 120 - -
Gma19g01517 553 Gene3D - 187 353 - -
Gma19g01517 553 PANTHER GH11602P 3 553 IPR037800 GO:0004402
Gma19g01517 553 ProSitePatterns Bromodomain signature. 451 509 IPR018359 -
Gma19g01517 553 CDD Bromo_gcn5_like 434 544 - -
Gma19g01517 553 PRINTS Bromodomain signature 463 479 IPR001487 GO:0005515
Gma19g01517 553 PRINTS Bromodomain signature 449 462 IPR001487 GO:0005515
Gma19g01517 553 PRINTS Bromodomain signature 498 517 IPR001487 GO:0005515
Gma19g01517 553 Pfam Acetyltransferase (GNAT) family 240 318 IPR000182 GO:0016407
Gma19g01517 553 CDD NAT_SF 240 295 - -
Gma19g01517 553 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 214 347 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01517 Gma-Chr19 44517611 44524921 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma19g01517 Bromodomain 7.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01517 K06062 - gmx:100791610 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01517 19 44517611 44524921 Gma03g01457 03 40802275 40809323 GST