Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01512 ATGGGTCTGGAAAAGAATCCTCTTGTGTTTTTCGATGTCTCAATTGATGGGGACCCTGTGGAAAGAATTGTTATTCAGCTTTTTGCCAGTATAGTTCCTAGGACAGCAGAGAATTTTCGGGCACTCTGTACAGGTGAGAAGGGCATTGGAGAATTGACGGGGAAACCTTTGCATTATAAAGGAACAAGCTTTCATCGTATAATTAGAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGCACAGGTGGAGAAAGTATATATGGAGGGAAATTTGTAGATGAAAATTTCAAACTAACACATGATGGACCTGGTGTTCTTTCTATGGCTAATAGTGGTCCTAACACAAATGGATCTCAGTTCTTTATTACATTCAAGCGCCAACCTCATCTTGACGGGAAACATGTTGTTTTTGGAAAAGTTGTCAACGGAATGGACATTTTGAAGAAAATTGAACCAGTGGGAACATCTGATGGGAAACCTACCCAACCAGTTAAAATTATTGATTGTGGTGAAGTCTCTGAAACAAAAATTCAGCATACTGCCGACAAGGAGAAAGGGAAAAGGAGAAAATCAGGAAAATCCCTATCTTCTGATGATGGTTCTGACAAAAAATCAAGGGGAAAAAGGAAAAAATCTTCCAAAGACACGAGGAAGAGAAGAAGGAGATACTCTACATCTGATAGCGATAGTGATAGCTACTCCtcagattctgagtcagattcagattctgaatcggattcaTCAGTTTCTGATTCTAGTTACTCTAGTGATGGGAAACACCAGAAGAGGAGAAGTAAGCGCAAGCATGGGAAGAAGAGGAAAATTGGACGAAAACAGAGAAAGAGAAGCCAGCACAGTAGAAGTAGAAGAGCAAGACGCAAGTCTAGGCGGAGTTCTGAGGATTCAAGTGATACAGATAGTGCTAGTGGCAGCAGTTCTGGCGATGAGAAAACTGATCGTCATGCCTCAGGTCGTAAAACACTTGCTGACAATGAAGCCCGAAGAAATCTAGACACAGGAAAACAATCTTCTAGCCCTCCTCAGCAAAGGCAAACTATTCCTGAACAAAAAATGGATCCCAAGGTTAGAAGAATTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAGAATGGTGCATTTGTGAATAACAGGCATGATACTGAAGCTGAATTTAGTAAACCTGCTAAGCAACATGCTAATTCAGATGATTTAAATCACAATAGAGGTGCAAGTCCTCGAAGAAGTCCTACCAGGGATTCTAGGGAGCTAAACCAAGGACATGCTTCATTGTTGGCTAGTCCTGGCCAAAAAGTTTCTGAACCTGCTGCCCCCAAACATGGTCAGGGCTTTTCAAAAAGCCCTTCACCAAATGGCATGCCTAAGCGTATCAAAAAAGGACGTGGCTTTACTGAGCGTTATGCCTTTGCACGCAGATATCGTACTCCTTCTCCAGAGCGGTCTCCTCGTACATATCGTTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGGGCGCTCTCCACCACGACGTTTTCGAAGCCCGCCAGGTGGCAGGAATCGTCCAAGATACCAAAGCAGAAGAAGTCGGAGTAGGAGCAACTCGCGCAGTCCTGTGCGTGGCCATTTCAGCGACCGTGACCGCAGCCGGAGTCCAAGACGTAGTCCTAGTCCAGAAGACAGGCGTCCTCCCATTAGTGACCAATTAAAATCCCGACTTGGTCCAAGAAGTGATGAACGATTGCCAGACAGGGGGAGGTCAAAGTCCAAATCTAGGAGCAATGGCTCTTCTTGCTCCAGATCCCCAGATGCTACACCACCAAAACGTTATGATAAAAGGACTTCCGTGTCTCGCAGCAGGTCTAGATCGAGCTCTCCATCTGGACAAAGGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGTCAGGGTAA 1980 0.4328 MGLEKNPLVFFDVSIDGDPVERIVIQLFASIVPRTAENFRALCTGEKGIGELTGKPLHYKGTSFHRIIRGFMAQGGDFSRGNGTGGESIYGGKFVDENFKLTHDGPGVLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGMDILKKIEPVGTSDGKPTQPVKIIDCGEVSETKIQHTADKEKGKRRKSGKSLSSDDGSDKKSRGKRKKSSKDTRKRRRRYSTSDSDSDSYSSDSESDSDSESDSSVSDSSYSSDGKHQKRRSKRKHGKKRKIGRKQRKRSQHSRSRRARRKSRRSSEDSSDTDSASGSSSGDEKTDRHASGRKTLADNEARRNLDTGKQSSSPPQQRQTIPEQKMDPKVRRIVDKQSHEEGELSPENGAFVNNRHDTEAEFSKPAKQHANSDDLNHNRGASPRRSPTRDSRELNQGHASLLASPGQKVSEPAAPKHGQGFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPERSPRTYRYGDRNIRRNFDRNTSYRSYSGRSPPRRFRSPPGGRNRPRYQSRRSRSRSNSRSPVRGHFSDRDRSRSPRRSPSPEDRRPPISDQLKSRLGPRSDERLPDRGRSKSKSRSNGSSCSRSPDATPPKRYDKRTSVSRSRSRSSSPSGQRGLVSYGDASPDSGSG 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01512 659 MobiDBLite consensus disorder prediction 179 209 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 179 659 - -
Gma19g01512 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gma19g01512 659 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 395 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 263 297 - -
Gma19g01512 659 SUPERFAMILY Cyclophilin-like 5 175 IPR029000 -
Gma19g01512 659 MobiDBLite consensus disorder prediction 359 378 - -
Gma19g01512 659 CDD cyclophilin_ABH_like 7 173 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 470 509 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 553 604 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 392 427 - -
Gma19g01512 659 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Gma19g01512 659 MobiDBLite consensus disorder prediction 341 358 - -
Gma19g01512 659 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 395 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 316 340 - -
Gma19g01512 659 MobiDBLite consensus disorder prediction 154 173 - -
Gma19g01512 659 Gene3D - 2 182 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01512 Gma-Chr19 44485676 44491690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01512 25 171 U-box Gene Family AT5G67530 52.000 9.59e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01512 K09566 - gmx:100791082 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01512 19 44485676 44491690 Gma03g01453 03 40774194 40779756 GST