Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01509 ATGTCGAATAGCCAAAATCCGAAATATGATGATAGCTCATTTCTCATTGACATAACCACCACTGTGAATTACACCATCAACACTGCCAAAAAGAGATGGCGTTTTGCTTATACAGCTATTTATTCTAGAAGGGTCATGCTTGCCTTGGCCAAAGAAGTCATATCTAAGAGAAATACAAACACTCATCCTTACTCTAAACTCTTCCAATCTCAATCTTCCGGTTCCGGAAGCATTCTTGATATCATTGAGCCACTAATTCCCCAACATGGGACCAATAATCATTATTCCTTGGTTCCTGATGTTGACAAAGCAAGACTTGCTAGCATGGTAAAGGACAAAAACTTGGAAGCCTTTGCTGAGTTTGGAGGAGTTGAAGGTGTTGCAAATATTCTTGGAACCATTCCAGCAAAGGGAATCAGTGGCAGCGACGATGACGTTGCCACACGGCGTGAATTGTTTGGTTCAAACACTTACCAGAGGCCTCCACCCAAGGTATTTCTAAGCTTTGTAGTGGAGGCTTTCAATGACACAACTATTCTGATCCTTCTTGTTTGTGCTGGCCTTTCCCTTGGATTTGGCATAAAAGAACATGGGCCAGGGGAAGGATGGTATGAAGGAGGGAGTATATTTGTAGCAGTATTTCTGGTAGTTGTTGTCACTGCACTCAGCAACTTCAGACAAGAGAGGCAATTTGATAAATTGTCTAAGATAAGCAACAACATCAAAGTTGAAGTTGTGAGAAATGGAAGGCCACAACAGATATCCATCTTTGAGGTACATGTGGGAGATATTGTATCACTTAAAATTGGTGATCAAATTCCAGCTGATGGGTTGTTCTTAAGTGGCTATTCTTTGCTAGTGGATGAATCAAGTATGACAGGTGAGAGCGACCATGTAGAAATTGAGCCTTCAAATAGCCCCTTTTTGCTGTCTGGTGCAAAAGTGGTGGATGGCTTTGCTCAGATGCTTGTGACATCTGTGGGAACCAACACAGCATGGGGTGAAATGATGAGCTCAATTTCGCGAGACACCAAGGAAAGGACACCATTGCAGGCTCGCCTTGACAAGTTAACCTCTTCTATTGGAAAGGTAGGCCTCGCAGTCGCTTTTCTTGTTCTCATAGTCTTGTTAATTCGTTATTTCACTGGAAACACGCAAGATGATAAAGGGAATCAGGAGTTCCAGGGGAGTAAAACCGATGTAAACGATGTTTTCAACGCGGTTGTGCGAATTGTTGCTGCTGCAGTCACCATTGTGGTTGTGGCAATCCCTGAGGGTCTGCCATTGGCTGTTACTCTCACACTTGCTTACTCCATGAAAAGAATGATGGCAGACCAAGCAATGGTGAGGAAACTTTCTGCTTGTGAAACTATGGGGTCAGCAACAGTTATTTGCACAGATAAAACTGGCACCTTAACTTTGAATCAAATGAGAGTCACCAAGTTTTGGCTTGGCCTAGAAAATGCTATGGAAAACTTTTCCAATGCAATGGCTCCTAAAGTTCTTGAGTTATTTCACCAAGGAGTTGGCCTCAACACAACTGGCAGTATATATAAACCTTCATCAGAATCTGAACCTGAAATTTCTGGTAGCCCAACAGAGAAAGCTATACTCTTGTGGGCCGCGTCAGATTTAGGCATGGACATGGACGAACTGAAGCGCACACATGAAGTACTCCATGTTGAAACGTTTAACTCGGAGAAGAAACGAAGTGGCGTGGCAATAAGGAAGAAGACCAACAGCACAGTTCACGTGCATTGGAAAGGTGCTGCAGAGATTATACTTGCAATGTGTTCTAATTACATTGACAATAACGGCATAGAAAAGTCCCTTGATGAAGATCGGAGTAAACTTGAGAAGATAATTCAAGGCATGGCTGCTAGTAGCCTTAGATGTATTGCTTTTGCTTACATGCACATTTCAGAAGATAATGATTATAACGATAAGGAGAAAGTGCATCAAATCCTTAGAAAAGATGGCTTGACCTTGCTAGGTATTGTTGGCCTCAAGGATCCATGCCGATCTGACGTTAAGAAGGCTGTGGAAACTTGTAAACTTGCAGGTGTTAGTATCAAGATGATCACTGGAGATAACATTTTCACTGCAAAGGCCATAGCAGCAGAATGTGGAATATTAGACCTTGATGGCCATGTAAATGCAGGAGAAGTGGTGGAAGGTGTGGAATTCAGGAACTACACGGAGGAAGAGAGAATGGAGAAAGTTGAGAAGATCCGCGTGATGGCAAGATCATCCCCTTTGGACAAACTTTTGATGGTGCAATGCTTGAAAAAGAAAGGCCATGTTGTTGCAGTCACGGGAGATGGCACAAATGATGCACCTGCTCTAAAAGAAGCTGATATTGGACTTTCTATGGGGATTCAAGGAACTGAAGTTGCCAAGGAGAGTTCTGACATTGTGATCTTAGATGACAACTTCAATTCTGTGGCCACTGTCTTAAGCGGTTTCTTCGGGAGATGTTCCCCTAACAACAGTTCAACTACTATGGGTGAATCTCATTATGGATACTCTAGGAGCATTGGCACTGGCTACAGAAAGGCCTACAAAGGAGTTGATGGAGAAACAGCCAATTGCTGTTCTCTTGGTTTTACAATTCAATGGAAAGTCAATCTTCAATGTAAATGGGAAGTATTGATGGTGGAACTCCTAAGGAAGTTTGCTGATACGGAGAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGCTGTGTCATGGCCAATTGCTTGGTTTACAAAGCTCGTACCTGTTTCAGATATAACGTTCTTTAGCCATCACGTTAAGTGGGTAAAACTAAGGACCAAGGATTTACTATGGTATGTTGAGCCTCATGCTTAG 2862 0.4259 MSNSQNPKYDDSSFLIDITTTVNYTINTAKKRWRFAYTAIYSRRVMLALAKEVISKRNTNTHPYSKLFQSQSSGSGSILDIIEPLIPQHGTNNHYSLVPDVDKARLASMVKDKNLEAFAEFGGVEGVANILGTIPAKGISGSDDDVATRRELFGSNTYQRPPPKVFLSFVVEAFNDTTILILLVCAGLSLGFGIKEHGPGEGWYEGGSIFVAVFLVVVVTALSNFRQERQFDKLSKISNNIKVEVVRNGRPQQISIFEVHVGDIVSLKIGDQIPADGLFLSGYSLLVDESSMTGESDHVEIEPSNSPFLLSGAKVVDGFAQMLVTSVGTNTAWGEMMSSISRDTKERTPLQARLDKLTSSIGKVGLAVAFLVLIVLLIRYFTGNTQDDKGNQEFQGSKTDVNDVFNAVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWLGLENAMENFSNAMAPKVLELFHQGVGLNTTGSIYKPSSESEPEISGSPTEKAILLWAASDLGMDMDELKRTHEVLHVETFNSEKKRSGVAIRKKTNSTVHVHWKGAAEIILAMCSNYIDNNGIEKSLDEDRSKLEKIIQGMAASSLRCIAFAYMHISEDNDYNDKEKVHQILRKDGLTLLGIVGLKDPCRSDVKKAVETCKLAGVSIKMITGDNIFTAKAIAAECGILDLDGHVNAGEVVEGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLSGFFGRCSPNNSSTTMGESHYGYSRSIGTGYRKAYKGVDGETANCCSLGFTIQWKVNLQCKWEVLMVELLRKFADTERLTWEQWGICIGIAAVSWPIAWFTKLVPVSDITFFSHHVKWVKLRTKDLLWYVEPHA 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01509 953 Gene3D - 475 672 IPR023299 GO:0000166
Gma19g01509 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 121 830 IPR023298 -
Gma19g01509 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 467 473 IPR018303 -
Gma19g01509 953 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 114 826 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma19g01509 953 Pfam haloacid dehalogenase-like hydrolase 463 786 - -
Gma19g01509 953 SFLD Haloacid Dehalogenase 447 819 - -
Gma19g01509 953 PRINTS Sodium/potassium-transporting ATPase signature 458 479 - -
Gma19g01509 953 PRINTS Sodium/potassium-transporting ATPase signature 207 227 - -
Gma19g01509 953 PRINTS Sodium/potassium-transporting ATPase signature 585 603 - -
Gma19g01509 953 SUPERFAMILY HAD-like 463 820 IPR036412 -
Gma19g01509 953 SMART Cation_ATPase_N_a_2 120 194 IPR004014 -
Gma19g01509 953 Gene3D - 172 461 - -
Gma19g01509 953 Pfam Cation transporter/ATPase, N-terminus 122 189 IPR004014 -
Gma19g01509 953 PRINTS P-type cation-transporting ATPase superfamily signature 772 791 - -
Gma19g01509 953 PRINTS P-type cation-transporting ATPase superfamily signature 288 302 - -
Gma19g01509 953 PRINTS P-type cation-transporting ATPase superfamily signature 665 676 - -
Gma19g01509 953 PRINTS P-type cation-transporting ATPase superfamily signature 465 479 - -
Gma19g01509 953 PRINTS P-type cation-transporting ATPase superfamily signature 796 808 - -
Gma19g01509 953 PRINTS P-type cation-transporting ATPase superfamily signature 687 697 - -
Gma19g01509 953 SUPERFAMILY Calcium ATPase, transduction domain A 240 339 IPR008250 -
Gma19g01509 953 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 472 669 IPR023299 GO:0000166
Gma19g01509 953 Gene3D - 142 341 - -
Gma19g01509 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 407 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01509 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 742 828 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01509 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 209 382 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01509 953 PANTHER CALCIUM-TRANSPORTING ATPASE 882 921 - -
Gma19g01509 953 PANTHER CALCIUM-TRANSPORTING ATPASE 17 830 - -
Gma19g01509 953 Pfam E1-E2 ATPase 241 443 - -
Gma19g01509 953 SFLD p-type atpase 447 819 IPR044492 -
Gma19g01509 953 PANTHER CATION TRANSPORTING ATPASE 882 921 - -
Gma19g01509 953 PANTHER CATION TRANSPORTING ATPASE 17 830 - -
Gma19g01509 953 Gene3D - 462 817 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01509 Gma-Chr19 44460358 44464572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01509 882 933 Primary Pumps ATPases AT3G63380 57.692 6.38e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01509 K01537 - gmx:100790034 1570.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01509 19 44460358 44464572 Gma03g01451 03 40753611 40757304 GST