Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01501 atggagcagtatgaaattctagaacagattggcaaaggtgcatttggttctgcccttcttgtgaggcacaagcacgaaaagaaaaagtatgtccttaaaaagatccgccttgctcgtcaaactgacagaacccgtagatctgcccaccaggagATGGAGCTTATATCTAAAGTTCGAAATCCATTTATTGTGGAATATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCATCATTGGCTATTGTGAAGCAGGGGATATGGCCGAAGCTATAAAAAAGGCTAATGGTGTTAACTTTCCTGAAGAGAAACTTTCTAAGTGGCTTGTTCAATTGCTGATGGCACTTGATTACTTGCATGGAAACCATATTCTTCATCGCGACGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCTAAAATGTTGACATCTGATGATCTTGCTTCTTCGGTTGTTGGGACTCCAAGTTATATGTGCCCTGAGCTTCTTGCTGATATACCCTATGGCTCGAAGTCTGATATTTGGTCTTTGGGATGTTGTATCTATGAAATGGCTGCTCACAAGCCAGCTTTCAAAGCTTTTGACATACAGTCATTGATTATCAAAATAAACAAGTGTATAGTAGCTCCCCTACCAACTATGTATTCTGCTGCTTTTCGAGGGCTTGTCAAAAGTATGCTGCGGAAAAATCCAGAGTTGAGGCCAACTGCTGCAGAATTACTAAATCATCCGCATCTTCAGCCTTACATTCATAAAATTCACCTAAAATTAAATAGCCCCATAAGAAGTACTTTTCCATTCCAATGGCCAGAGTCAAATTACATAAGGAGAACTCAGTTTGTAGAGCCAGAGTCTGTTTCTACTCTTTCTGATCTAGATAAATGCTTGTCATTCAACAATGACAGGACCTTGAATCCTAGTATTTCTGGAACTGAACAAATTTCTCAGTGTTCTACTGAAAGAGCTGATGGATTATCCACTTGTTCAGAAGAGAAGATCTATGAACTATCTGTAGGTTGTGTTCGTGGCAAATACAAAACTGACAAATCAAAAGCCACAAAGTTCTCAACCGTTGAGAGAACACCAAGATCTAGAGGAGTTACAGTTTCTGCCACTACCAAAAGGCAAACAATGGCAACATCAAAGACAACCCATTCTGGTCCAAGTGATTCACTTCCAGCATCTCATGCACCATCTGGAAAATTTTCCACACCACCAAGAGCCAGGGCAAGGGCAACACCAAACTTGTACACTAATGTTCTTGGAAGTGTAGACTCTCTTGACGTTTCCATTAATGCACCGCGAATTGACAAGATTGCCGAATTCCCAATGACTTTCTGCGAGGATCCTTTTTCACCTATCCGTGGACCATCATCAACATCTGCACGTTGCTCTTCTAGCTCAGCAGGAAGTACTGCTGATTGCTCCATCACAAAGGACAAGTGTACAATCCAGGAGGACAAAGTTATTCTCCCCACAAGTATCACTAATGCTTGCCCGGGTCCAAAGGGCACTGAATGCTCTCCTGAGCACGTAAAAGCTTGTGTTTCAAGCCATTCCTCTGCTGACTTAGATCAGCACTGGTTTGACACCTCGTCGTACCAGCAACGAGCAGAGGCACTGGAGGGGTTGCTGGAGTTCAGTGCCAGGCTCCTACAACAAGAAAGGTTTGATGAGCTTGGGGTGTTGCTGAAGCCATTCGGGCCTGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTTAAACAAACTGCGGTCTAA 1809 0.3864 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIIIGYCEAGDMAEAIKKANGVNFPEEKLSKWLVQLLMALDYLHGNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDIQSLIIKINKCIVAPLPTMYSAAFRGLVKSMLRKNPELRPTAAELLNHPHLQPYIHKIHLKLNSPIRSTFPFQWPESNYIRRTQFVEPESVSTLSDLDKCLSFNNDRTLNPSISGTEQISQCSTERADGLSTCSEEKIYELSVGCVRGKYKTDKSKATKFSTVERTPRSRGVTVSATTKRQTMATSKTTHSGPSDSLPASHAPSGKFSTPPRARARATPNLYTNVLGSVDSLDVSINAPRIDKIAEFPMTFCEDPFSPIRGPSSTSARCSSSSAGSTADCSITKDKCTIQEDKVILPTSITNACPGPKGTECSPEHVKACVSSHSSADLDQHWFDTSSYQQRAEALEGLLEFSARLLQQERFDELGVLLKPFGPEKVSPRETAIWLTKSFKQTAV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01501 602 MobiDBLite consensus disorder prediction 363 421 - -
Gma19g01501 602 CDD STKc_Nek 3 258 - -
Gma19g01501 602 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01501 602 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01501 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Gma19g01501 602 SUPERFAMILY Protein kinase-like (PK-like) 1 312 IPR011009 -
Gma19g01501 602 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Gma19g01501 602 Gene3D Transferase(Phosphotransferase) domain 1 87 299 - -
Gma19g01501 602 MobiDBLite consensus disorder prediction 371 410 - -
Gma19g01501 602 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01501 602 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gma19g01501 602 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 591 - -
Gma19g01501 602 PANTHER SERINE/THREONINE-KINASE NEK4 1 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01501 Gma-Chr19 44365541 44373183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01501 10 259 MAP Kinase Kinase Kinase AT1G53570 31.373 1.73e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Gma19g01501 Pkinase 4.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01501 K08857 - gmx:100792678 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01501 19 44365541 44373183 Gma19g01501 19 44365541 44373183 ECH
Gma19g01501 19 44365541 44373183 Gma03g01444 03 40658246 40664514 GST
Gma19g01501 19 44365541 44373183 Gma10g00280 10 2571752 2577807 PCT
Gma19g01501 19 44365541 44373183 Gma02g01321 02 15321396 15327427 PCT
Gma10g00280 10 2571752 2577807 Gma19g01501 19 44365541 44373183 PCT
Gma02g01321 02 15321396 15327427 Gma19g01501 19 44365541 44373183 PCT