Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01487 atgccatacacaaacacgccgcgaacaagaaaaaGAAACAACCTTAGCCGCTTCAACCTGAACTTATGTTTCTCCAATTCCATGCAACCGTTCACACCCAAATCTCCTCCGACAATCCCCACCGCCACTTCCTCGACCGTTGATCACAATCACAACCGTCCATCACCAGCCGCCATGTCATCAACCCCGAACTTTGACAATGATCGCAGTACCGTGACCCCACAAAACCCATTTCCGAGCCTTGGACCCGAACCCGAACCTGCCGACCTAGCCACCGCTTTTGCCTCCCAACGTTTCTTCTTCACCTCCCCCGGCCGCTCCAACTCCATCATCGAATCCGCCAACACCACCGACGCCGACTGTTTTACCACATCCTCATCCTCGCTGTCACCGGTGCCGGCAGACGAATCCGCCACCATCGACAAAATACAGGACCAACTCAAGAGTCTCATTCTTGGTTTGTCCAGTTCTGACGAGAGCGAAGCAAAGGCGTTATTGGACCGCAGCGTTGCGGTAAGAAAGTACTCGCCGGACCCTTACGCGGACTTCCGGCAGTCGATGGAGGAGATGGTGGCGGCGCGTCCCGAGTTGATGGACGTGGCGGCCAAATGGCGCGAGCTGCACGAGCTTCTTCTTTGCTATCTTGCGCTCAACCCGAAGAGCACGCACAAGTTCATTCTCCGTGCTTTTTCTGATTTTCTCCTCAGCCTCATATCGCGTTCTTATTTGCCGCCGCAGGATCCCGGTTCCGGTGACATCGCCGGCGACGGTGGTGGATGCTTGAGTTAG 789 0.5336 MPYTNTPRTRKRNNLSRFNLNLCFSNSMQPFTPKSPPTIPTATSSTVDHNHNRPSPAAMSSTPNFDNDRSTVTPQNPFPSLGPEPEPADLATAFASQRFFFTSPGRSNSIIESANTTDADCFTTSSSSLSPVPADESATIDKIQDQLKSLILGLSSSDESEAKALLDRSVAVRKYSPDPYADFRQSMEEMVAARPELMDVAAKWRELHELLLCYLALNPKSTHKFILRAFSDFLLSLISRSYLPPQDPGSGDIAGDGGGCLS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01487 262 ProSiteProfiles OVATE domain profile. 172 236 IPR006458 -
Gma19g01487 262 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 19 242 IPR038933 GO:0045892
Gma19g01487 262 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 170 238 IPR006458 -
Gma19g01487 262 MobiDBLite consensus disorder prediction 29 87 - -
Gma19g01487 262 Pfam Transcriptional repressor, ovate 176 237 IPR006458 -
Gma19g01487 262 MobiDBLite consensus disorder prediction 29 77 - -
Gma19g01487 262 PANTHER TRANSCRIPTION REPRESSOR OFP12 19 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01487 Gma-Chr19 44220067 44221117 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma19g01487 Ovate 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01487 - - gmx:102663086 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01487 19 44220067 44221117 Gma03g01430 03 40513983 40514946 GST
Gma19g01487 19 44220067 44221117 Gma10g00264 10 2433351 2434016 PCT
Gma19g01487 19 44220067 44221117 Gma02g01333 02 15485902 15486641 PCT
Gma10g00264 10 2433351 2434016 Gma19g01487 19 44220067 44221117 PCT
Gma02g01333 02 15485902 15486641 Gma19g01487 19 44220067 44221117 PCT