Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01462 ATGACTATGACCATGTCAAGAGTGATGTGTAGACCAACGCAGCCACTGAAAAACGTTCCTACTAATACATCCAGTGGCCAAAACCAGATAATAAGGCCAAAAGAGAAGGTGGTGTTGGTGATGGGAGCAACCGGAAGCGGCAAAACGAGGTTGTCGATCGACCTAGCCACATGTTTCCCATCAGAAATCATAAACTCCGACAAAATGCAAGTCTATTCGGGCCTCGACGTTGTCACAAACAAAGCAACAAAAGAAGAACAACGTGGGATCCCTCACCACCTGCTAGGGACACAGAACCCCAACAAGGAGTTCACTGCCTCTGACTTCTGCGACATGGCGTCACACGCCATTGAATCCATCACAAACCGCGAGAAGGTTCCAATAATTGTTGGAGGCTCTAACTCATACATGGAGGCCCTTGTGGACAAGTTCGGGACACGTTACGAATGGTGTTGTCTCTGGGTGGATGTTTCCACGCCCGTGCTTCATTCCTACGTTGCGCAGCGCGTGGATCAAATGATTGGTGGCGGAATGGTGAACGAGCTGAGACCCTTTTTCAGTCCCAACGGGGATTACTCGAAGGGGATAAGAAAGGCCATTGGGGTGCCGGAGTTCCACGAGTATTTTCGGAGAGAAGCGTTTTCAAGCACCGAAATGAGGATGAGGTTGCTGCAGGACGCGGTGAGGGAGGTGAAGAGGAACACGTGCCACTTGGCATGCAAGCAGCTTGGGAGGATTCAGTGGCTGAGGAGTGTTAAGGGATGGAAGATTCACCGTGTTTGTGCCACTCCCGTGTTCCAGAAACGTGGCCAGGAAGCGAATGATGCGTGGAAGAACGTTGTGGCACAGCCGTGTGCCTCCATAGTTTCCCAGTTTCTCTATAGTGCCAATGCTGTTTCTGGGAGAGTGCCAGCTTCTTTGCAGCAAAATAGTCATTAA 939 0.5059 MTMTMSRVMCRPTQPLKNVPTNTSSGQNQIIRPKEKVVLVMGATGSGKTRLSIDLATCFPSEIINSDKMQVYSGLDVVTNKATKEEQRGIPHHLLGTQNPNKEFTASDFCDMASHAIESITNREKVPIIVGGSNSYMEALVDKFGTRYEWCCLWVDVSTPVLHSYVAQRVDQMIGGGMVNELRPFFSPNGDYSKGIRKAIGVPEFHEYFRREAFSSTEMRMRLLQDAVREVKRNTCHLACKQLGRIQWLRSVKGWKIHRVCATPVFQKRGQEANDAWKNVVAQPCASIVSQFLYSANAVSGRVPASLQQNSH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01462 312 Pfam IPP transferase 147 250 - -
Gma19g01462 312 Pfam IPP transferase 70 144 - -
Gma19g01462 312 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 298 - -
Gma19g01462 312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 166 IPR027417 -
Gma19g01462 312 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 159 257 - -
Gma19g01462 312 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 298 IPR039657 -
Gma19g01462 312 MobiDBLite consensus disorder prediction 1 27 - -
Gma19g01462 312 Gene3D - 34 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01462 Gma-Chr19 43846581 43847831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01462 145 306 C2H2 Transcription Factor Family AT2G27760 29.630 5.00e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01462 K10760 - gmx:100777757 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01462 19 43846581 43847831 Gma19g01462 19 43846581 43847831 ECH
Gma19g01462 19 43846581 43847831 Gma03g01399 03 40119512 40120441 GST
Gma19g01462 19 43846581 43847831 Gma10g00242 10 2226056 2227261 PCT
Gma19g01462 19 43846581 43847831 Gma02g01355 02 15697302 15698664 PCT
Gma10g00242 10 2226056 2227261 Gma19g01462 19 43846581 43847831 PCT
Gma02g01355 02 15697302 15698664 Gma19g01462 19 43846581 43847831 PCT