Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01438 ATGCCACTCTTTGTGTTCCTAGCCACCATCTTCCTCACTCTCCCAACCCTCTCCCTCTCTGTCACATCATGTCTCCTCAACACCACCCTCCTCCGTTCAAGACCCTCCTCCTCCGTCGACTCCGCCACGCGCTGTCGTTACATTCTCCAAACCATTCGTGTTCTCCAATCCGATTACCTCCACCGCACCGGTTTCTTCTTCCCTCCTTCTAGTTCTTCCTTCTCGTGCTGGAACACTCTCCAATCTTCCATCAACCAATACGACATTCGCTCCTCCTGCAACCTCCCTTCCTCTTCCATTTCCCTCTCCTGCAACAACATCACCACCAAATCCCAGTTCGAAAATTCTCTTCCAAACTCGGCTCTTAAACCCGTGTGGAGCACTTGTAACCAATCTCTTAAGAGTTCCTTAGCTTGTTCTCAATGCAATAAAACTTTGTCCAAGTTGGATTCTTTTCTCACGGAACCGTCCACTGGGGAACTCGTTGATTGCAAGGCCATTGCTTCTATCTATGCTGCTTCCTTCTCCGATCCGCAGGACTCCGGCACCGCCAACTGTTTGTTCAACTTCGGTTTTTCCTCTTCGGTTTCCAGTGGTAAGCGTCGAAACATTCCTGTTGTGGTTTTTTCTGTGTTGGCCTTTTTTTTGTTGGTCTTTGGTGCTTTATGGGCTTACTTTAGATTCAAGCAAAAGCAGAAGAAAAAAGATATTGGTAAAATTGAGATGGGTTTGGGTTCTGGGTTGGATTCTGGGTTTGATTCTTTGAACCAAAGTACCACTTTGATTAGGTTCACTTTTGATGAGATTAAAAAGGCTAGTAGGAATTTCGCCGGTGACAACATAATTGGGAAGGGGGGTTATGGGAATGTTTATAAAGGGGTGCTTTTTGATGGGACTCGAGTTGCATTGAAGAGATTCAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCATGAGGTTGAGGTAATTGCAAGTGTTAGGCATGTGAACCTTGTTGCCCTCAGAGGTTATTGCACTGCCACAACTAATTTAGAGGGTCACCAGAGGATTATTGTCACTGATTTGATGGAAAATGGGAGTCTTTGTGATCATTTATTTGGTTCTGCCAAGAAGAAACTCAGTTGGTCAATTCGTCAAAAGATTGCTTTCGGGACCGCTAGGgggttggcttatttgcactatggagctcaaccttccatcatccatagggatattaaatctagtaacatacttctggaccacaattttgaagccaaggttgcggattttggattagcaaagtttaatcctgagggaatgactcatatgagcactagagtggctggaactaagggctatgttgctcctgagtatgccttgtatggacagttgacagagagaagtgatgttttcagttttggtgttgtgcttcttgagctcttaagtgggaaaaagGCTCTTCATGTGGACAATGATGGCCAACCCTCTGCACTCACTGACTTTGCTTGGTCATTGGTTAGGAATGGTAAAGCTTTGGATGTTATTGAAGATGGTATGCCAGAACTTGGTCCAATTGAAGTTCTTGAGAAGTATGTGTTGGTTGCTGTACTATGTTGTCATCCACAATTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTGGAGACAGAAGAATTGGAACAGCCAATCTCTTCTATTGCTGGGAGGATTGATGTTGATGAGAAATCAGTCAGTAGTAACTAG 1731 0.3772 MPLFVFLATIFLTLPTLSLSVTSCLLNTTLLRSRPSSSVDSATRCRYILQTIRVLQSDYLHRTGFFFPPSSSSFSCWNTLQSSINQYDIRSSCNLPSSSISLSCNNITTKSQFENSLPNSALKPVWSTCNQSLKSSLACSQCNKTLSKLDSFLTEPSTGELVDCKAIASIYAASFSDPQDSGTANCLFNFGFSSSVSSGKRRNIPVVVFSVLAFFLLVFGALWAYFRFKQKQKKKDIGKIEMGLGSGLDSGFDSLNQSTTLIRFTFDEIKKASRNFAGDNIIGKGGYGNVYKGVLFDGTRVALKRFKNCSVAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLCDHLFGSAKKKLSWSIRQKIAFGTARGLAYLHYGAQPSIIHRDIKSSNILLDHNFEAKVADFGLAKFNPEGMTHMSTRVAGTKGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALHVDNDGQPSALTDFAWSLVRNGKALDVIEDGMPELGPIEVLEKYVLVAVLCCHPQLYARPTMDQVVKMLETEELEQPISSIAGRIDVDEKSVSSN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01438 576 Pfam Protein kinase domain 280 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01438 576 Pfam SPARK 22 154 IPR043891 -
Gma19g01438 576 CDD STKc_IRAK 282 551 - -
Gma19g01438 576 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
Gma19g01438 576 Gene3D Phosphorylase Kinase; domain 1 250 355 - -
Gma19g01438 576 SUPERFAMILY Protein kinase-like (PK-like) 253 551 IPR011009 -
Gma19g01438 576 ProSiteProfiles Protein kinase domain profile. 276 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01438 576 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKF3-RELATED 17 574 - -
Gma19g01438 576 SMART serkin_6 276 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01438 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Gma19g01438 576 Gene3D Transferase(Phosphotransferase) domain 1 357 566 - -
Gma19g01438 576 PANTHER OS01G0253100 PROTEIN 17 574 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01438 Gma-Chr19 43645259 43646989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01438 7 570 Receptor kinase-like Gene Family AT2G48010 57.093 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gma19g01438 Pkinase 9.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01438 - - gmx:100819980 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01438 19 43645259 43646989 Gma19g01438 19 43645259 43646989 ECH
Gma03g01372 03 39890880 39892137 Gma19g01438 19 43645259 43646989 ECH
Gma19g01438 19 43645259 43646989 Gma03g01372 03 39890880 39892137 GST
Gma19g01438 19 43645259 43646989 Gma10g00225 10 2071525 2074300 PCT
Gma19g01438 19 43645259 43646989 Gma02g01372 02 15890879 15892881 PCT
Gma10g00225 10 2071525 2074300 Gma19g01438 19 43645259 43646989 PCT
Gma02g01372 02 15890879 15892881 Gma19g01438 19 43645259 43646989 PCT