Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01437 ATGTCCTTTCCCTTCTATTTCTACATCTTTTCTGTTCTTTTCCTTACCTTGTATCTCCCACCTCCTTCCCTGGCCGCAAACCACACCGTCCCATGCCCCCTCCACGTCGACGTCCTCCGCGAGGTTGGCGGCGGGCGGCGGCCCAAGTTCGACTCCGGCACGCAGTGCCATTACATCCTCCAAGCCCTCCACCTCCTCCAGGCCGACTACCTCCGGCGCAGCAGCCTCTTCGTTCCGCCGTTGAACTCCTCGGAGTCGTGCTGGAAGACCTTCCAATCCTTCATCAACGAGTTCGACCCCAGCATCACCGACATCCGCGCCTCCTGCGGCTTCAGAACCGAGTGGATCTCCCAGGGCTGCATGAACTTCACCACCAAACAAGAATTCGAAGAAATTGTTCCCCCCAACGCAATCCAACCCGTGGTAGCGGACTGCAACCAGCCCCTCGATAACAACGCCCCCTGCGCCCTCTGCATCACCAAACTCTCCAGCATGTTATCCTACTTAACCGGAACAACCGTAGGTAACGTCACCGATTGCAGAGCCTATACTCAAATCTACGCCGCTTCTCTTTCTGATCAATACGGAGCCTCTGATCCTGGAACAGCTAAGTGCCTCTTCGGTCTCGATTTTTCCTCCTCCGGCTCCGGTGGTAAGCGACGAAAAATCCTTATTGCGGTCGTTTCCGTTTTCTGTGTGTTGGCTTTGGCTGTGTTTGCTGGGCTTTGGGCTTACTTGAGATTCAAGAAGAGGAAGGAGGTTGCTGGAACAACTGAGCTGGGTTTGGGTTCTGGGTTGGATTCAATGAACCAGAGCACCACTTTGATTAGGTTCACTTTTGATGACATTAAAAAGGCTACCAGGAACTTCTCCAGGGATAACATAATCGGAAGTGGTGGTTACGGGAATGTTTACAAAGGGATGTTATTGGATGGTAGCCAAGTTGCTTTTAAAAGGTTTAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCATGAAGTTGAGGTTATTGCGAGTGTGAGGCATGTGAATCTTGTTACCTTGAGAGGTTATTGTACTGCTACCACCAATTTGGAAGGCCACCAGAGGATTATTGTCACTGATTTGATGGAAAACGGGAGTCTTTATGATCATTTATTCGGTTCTGCTAAGAAGAATCTCAatagaagtgatgtgttcagctttggggttgtgcttcttgagctcttgagtgggagaaaggccCTTCAGACGGACAATGATGGCCAACCCGCTGCACTCACTGACTTTGCTTGGTCGTTAGTTAGGAATGGTAGTGCTTTGGATGTTGTTGAAGATGGTGTTCCAGAACCTGGTCCACCAGAAGTTCTTGAGAAGTATGTGTTGGTTGCTGTGCTGTGTTCTCATCCACAGCTATATGCTAGGCCTACAATGGATCAGGTTGTTAAAATGCTTGAGACAGATGAATCTGTGCCCTCATTGATGGAAAGGCCAATTCCTTTTATTGCTGGGAGGCTTGATATTGAGAAATCTGCGCTGAGTAACTCGGGTCACCTATGCAGTCCAACTGGTTATCAAGCTTATACATTACAAGCTCGACGAAAATCTAATTCTAAGGAGGAAGAAGAAGAAGAAGAAGGAAGTTCGGTGGCTGAGACTGTTACAACAGATTGA 1656 0.4716 MSFPFYFYIFSVLFLTLYLPPPSLAANHTVPCPLHVDVLREVGGGRRPKFDSGTQCHYILQALHLLQADYLRRSSLFVPPLNSSESCWKTFQSFINEFDPSITDIRASCGFRTEWISQGCMNFTTKQEFEEIVPPNAIQPVVADCNQPLDNNAPCALCITKLSSMLSYLTGTTVGNVTDCRAYTQIYAASLSDQYGASDPGTAKCLFGLDFSSSGSGGKRRKILIAVVSVFCVLALAVFAGLWAYLRFKKRKEVAGTTELGLGSGLDSMNQSTTLIRFTFDDIKKATRNFSRDNIIGSGGYGNVYKGMLLDGSQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSAKKNLNRSDVFSFGVVLLELLSGRKALQTDNDGQPAALTDFAWSLVRNGSALDVVEDGVPEPGPPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFIAGRLDIEKSALSNSGHLCSPTGYQAYTLQARRKSNSKEEEEEEEGSSVAETVTTD 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01437 551 Pfam SPARK 30 180 IPR043891 -
Gma19g01437 551 PANTHER OS01G0253100 PROTEIN 27 388 IPR045271 GO:0004714|GO:0006468
Gma19g01437 551 MobiDBLite consensus disorder prediction 525 551 - -
Gma19g01437 551 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 389 532 - -
Gma19g01437 551 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 27 388 - -
Gma19g01437 551 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Gma19g01437 551 SUPERFAMILY Protein kinase-like (PK-like) 271 489 IPR011009 -
Gma19g01437 551 PANTHER OS01G0253100 PROTEIN 389 532 IPR045271 GO:0004714|GO:0006468
Gma19g01437 551 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Gma19g01437 551 Gene3D Transferase(Phosphotransferase) domain 1 372 492 - -
Gma19g01437 551 ProSiteProfiles Protein kinase domain profile. 290 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01437 551 Coils Coil 519 539 - -
Gma19g01437 551 Pfam Protein tyrosine and serine/threonine kinase 293 385 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01437 Gma-Chr19 43638310 43640220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01437 390 524 Receptor kinase-like Gene Family AT2G48010 67.391 2.53e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gma19g01437 SPARK 2.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01437 - - gmx:100819453 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01437 19 43638310 43640220 Gma03g01371 03 39878984 39885952 GST