Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01436 ATGAAGGACGAGGTGGATTCCCCTGTTGGTGTTCTTGAGGACTATTTCAAGAGCTCGGAATCAGAAACTAGTTCTTCCAAAGAACCCAGTACTATTGTGGATTCTGATAAGTCAAAACCCGGTTCTAGGTGGCTTGCGTTTCTTCAATTGTTGAGGGACACATCGAAGAAGCCAATAGCCACATTGCATCCTCTTAGTGTCCTCAAGCTTTCGAGAAGAATGAGCAGTAGCATGAGGGAGACTATAATAGATGCAGATTCGTCCTTGCATAGACCACCCTGGAAGATCTTTACTCACCATGAGATACAAATTGCAACCAATTGCTTCACCCAAGAAAATTTTATTGGAAAGGGTGGTTATGCTGAGGTTTACAAAGGCTGTTTGCCAAATGGTCAGCTGGTAGCGATTAAACGGCTGACACATGGAACAGAAAATGAAACTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCACCCCAATACTGCTAAGTTAGTTGGCTATGGGGTGGAGGGAGGAATGCATTTAGTGCTTGAGTTGTCTGAAAAAGGGTGCTTAGCTTCAGTGCTTAATGGTTTCAAGGAGAAACTACCATGGTCTATAAGGCAGAAAATAGCATTAGGAACAGCTAAGGGTATAATGTATCTTCATGAAGGTTGTCAAAGAAGAATTATCCATAGAGATATAACAGCAGCAAATATCTTGCTTACCGAGGACTTTGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACCCATCACACTGTTTCAAAAATTGAAGGGACTTTTGGTTATCTTGCTCCTGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTAGTGCTATTAGAATTAGTCACAGGGAGACGAGCACTTGATCATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGCTGAAAAAGAATTCTATTAGGGAGCTGATTGATCCTTCATTAGCCGATGATTTTGACTGTCGTCAGATTAAAATTATGCTCTGGGCGGCTTCTTTATGCATTCAACAATCTTCTATTCATCGTCCCTTTATGAAACAGGTTGTACAACTTTTGAATGGTAACCTTAGCTGCTTTAAGTTCACGAAGAAATCTCAACATCCATTCTTCCGAAAAGTCTTTCAAGAAGAGCTTCTTGACGATTCTGATTAA 1218 0.4105 MKDEVDSPVGVLEDYFKSSESETSSSKEPSTIVDSDKSKPGSRWLAFLQLLRDTSKKPIATLHPLSVLKLSRRMSSSMRETIIDADSSLHRPPWKIFTHHEIQIATNCFTQENFIGKGGYAEVYKGCLPNGQLVAIKRLTHGTENETIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSEKGCLASVLNGFKEKLPWSIRQKIALGTAKGIMYLHEGCQRRIIHRDITAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDHSQQSLVLWAKPLLKKNSIRELIDPSLADDFDCRQIKIMLWAASLCIQQSSIHRPFMKQVVQLLNGNLSCFKFTKKSQHPFFRKVFQEELLDDSD 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01436 405 ProSiteProfiles Protein kinase domain profile. 109 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01436 405 SUPERFAMILY Protein kinase-like (PK-like) 89 374 IPR011009 -
Gma19g01436 405 ProSitePatterns Protein kinases ATP-binding region signature. 115 137 IPR017441 GO:0005524
Gma19g01436 405 Gene3D Transferase(Phosphotransferase) domain 1 186 392 - -
Gma19g01436 405 MobiDBLite consensus disorder prediction 17 37 - -
Gma19g01436 405 Pfam Protein tyrosine and serine/threonine kinase 112 372 IPR001245 GO:0004672|GO:0006468
Gma19g01436 405 ProSitePatterns Tyrosine protein kinases specific active-site signature. 228 240 IPR008266 GO:0004672|GO:0006468
Gma19g01436 405 Gene3D Phosphorylase Kinase; domain 1 80 183 - -
Gma19g01436 405 PANTHER OS08G0249100 PROTEIN 1 403 - -
Gma19g01436 405 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 403 - -
Gma19g01436 405 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01436 Gma-Chr19 43631927 43634815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01436 97 376 Receptor kinase-like Gene Family AT1G53420 41.667 3.95e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma19g01436 PK_Tyr_Ser-Thr 3.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01436 - - gmx:100818913 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01436 19 43631927 43634815 Gma03g02223 03 47556379 47566552 ECH
Gma19g01436 19 43631927 43634815 Gma10g01549 10 42566487 42577405 ECH
Gma19g01436 19 43631927 43634815 Gma19g01436 19 43631927 43634815 ECH
Gma03g01370 03 39872119 39874639 Gma19g01436 19 43631927 43634815 ECH
Gma15g00942 15 7859179 7862732 Gma19g01436 19 43631927 43634815 ECH
Gma19g01436 19 43631927 43634815 Gma03g01370 03 39872119 39874639 GST
Gma19g01436 19 43631927 43634815 Gma10g00224 10 2060473 2064206 PCT
Gma19g01436 19 43631927 43634815 Gma02g01373 02 15903121 15906859 PCT
Gma10g00224 10 2060473 2064206 Gma19g01436 19 43631927 43634815 PCT
Gma02g01373 02 15903121 15906859 Gma19g01436 19 43631927 43634815 PCT