Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g01436 | ATGAAGGACGAGGTGGATTCCCCTGTTGGTGTTCTTGAGGACTATTTCAAGAGCTCGGAATCAGAAACTAGTTCTTCCAAAGAACCCAGTACTATTGTGGATTCTGATAAGTCAAAACCCGGTTCTAGGTGGCTTGCGTTTCTTCAATTGTTGAGGGACACATCGAAGAAGCCAATAGCCACATTGCATCCTCTTAGTGTCCTCAAGCTTTCGAGAAGAATGAGCAGTAGCATGAGGGAGACTATAATAGATGCAGATTCGTCCTTGCATAGACCACCCTGGAAGATCTTTACTCACCATGAGATACAAATTGCAACCAATTGCTTCACCCAAGAAAATTTTATTGGAAAGGGTGGTTATGCTGAGGTTTACAAAGGCTGTTTGCCAAATGGTCAGCTGGTAGCGATTAAACGGCTGACACATGGAACAGAAAATGAAACTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCACCCCAATACTGCTAAGTTAGTTGGCTATGGGGTGGAGGGAGGAATGCATTTAGTGCTTGAGTTGTCTGAAAAAGGGTGCTTAGCTTCAGTGCTTAATGGTTTCAAGGAGAAACTACCATGGTCTATAAGGCAGAAAATAGCATTAGGAACAGCTAAGGGTATAATGTATCTTCATGAAGGTTGTCAAAGAAGAATTATCCATAGAGATATAACAGCAGCAAATATCTTGCTTACCGAGGACTTTGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACCCATCACACTGTTTCAAAAATTGAAGGGACTTTTGGTTATCTTGCTCCTGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTAGTGCTATTAGAATTAGTCACAGGGAGACGAGCACTTGATCATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGCTGAAAAAGAATTCTATTAGGGAGCTGATTGATCCTTCATTAGCCGATGATTTTGACTGTCGTCAGATTAAAATTATGCTCTGGGCGGCTTCTTTATGCATTCAACAATCTTCTATTCATCGTCCCTTTATGAAACAGGTTGTACAACTTTTGAATGGTAACCTTAGCTGCTTTAAGTTCACGAAGAAATCTCAACATCCATTCTTCCGAAAAGTCTTTCAAGAAGAGCTTCTTGACGATTCTGATTAA | 1218 | 0.4105 | MKDEVDSPVGVLEDYFKSSESETSSSKEPSTIVDSDKSKPGSRWLAFLQLLRDTSKKPIATLHPLSVLKLSRRMSSSMRETIIDADSSLHRPPWKIFTHHEIQIATNCFTQENFIGKGGYAEVYKGCLPNGQLVAIKRLTHGTENETIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSEKGCLASVLNGFKEKLPWSIRQKIALGTAKGIMYLHEGCQRRIIHRDITAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDHSQQSLVLWAKPLLKKNSIRELIDPSLADDFDCRQIKIMLWAASLCIQQSSIHRPFMKQVVQLLNGNLSCFKFTKKSQHPFFRKVFQEELLDDSD | 405 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g01436 | 405 | ProSiteProfiles | Protein kinase domain profile. | 109 | 392 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma19g01436 | 405 | SUPERFAMILY | Protein kinase-like (PK-like) | 89 | 374 | IPR011009 | - | |
Gma19g01436 | 405 | ProSitePatterns | Protein kinases ATP-binding region signature. | 115 | 137 | IPR017441 | GO:0005524 | |
Gma19g01436 | 405 | Gene3D | Transferase(Phosphotransferase) domain 1 | 186 | 392 | - | - | |
Gma19g01436 | 405 | MobiDBLite | consensus disorder prediction | 17 | 37 | - | - | |
Gma19g01436 | 405 | Pfam | Protein tyrosine and serine/threonine kinase | 112 | 372 | IPR001245 | GO:0004672|GO:0006468 | |
Gma19g01436 | 405 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 228 | 240 | IPR008266 | GO:0004672|GO:0006468 | |
Gma19g01436 | 405 | Gene3D | Phosphorylase Kinase; domain 1 | 80 | 183 | - | - | |
Gma19g01436 | 405 | PANTHER | OS08G0249100 PROTEIN | 1 | 403 | - | - | |
Gma19g01436 | 405 | PANTHER | PROTEIN KINASE FAMILY PROTEIN | 1 | 403 | - | - | |
Gma19g01436 | 405 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g01436 | Gma-Chr19 | 43631927 | 43634815 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g01436 | 97 | 376 | Receptor kinase-like Gene Family | AT1G53420 | 41.667 | 3.95e-67 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Gma19g01436 | PK_Tyr_Ser-Thr | 3.7e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma19g01436 | - | - | gmx:100818913 | 801.971 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma19g01436 | 19 | 43631927 | 43634815 | Gma03g02223 | 03 | 47556379 | 47566552 | ECH | |
Gma19g01436 | 19 | 43631927 | 43634815 | Gma10g01549 | 10 | 42566487 | 42577405 | ECH | |
Gma19g01436 | 19 | 43631927 | 43634815 | Gma19g01436 | 19 | 43631927 | 43634815 | ECH | |
Gma03g01370 | 03 | 39872119 | 39874639 | Gma19g01436 | 19 | 43631927 | 43634815 | ECH | |
Gma15g00942 | 15 | 7859179 | 7862732 | Gma19g01436 | 19 | 43631927 | 43634815 | ECH | |
Gma19g01436 | 19 | 43631927 | 43634815 | Gma03g01370 | 03 | 39872119 | 39874639 | GST | |
Gma19g01436 | 19 | 43631927 | 43634815 | Gma10g00224 | 10 | 2060473 | 2064206 | PCT | |
Gma19g01436 | 19 | 43631927 | 43634815 | Gma02g01373 | 02 | 15903121 | 15906859 | PCT | |
Gma10g00224 | 10 | 2060473 | 2064206 | Gma19g01436 | 19 | 43631927 | 43634815 | PCT | |
Gma02g01373 | 02 | 15903121 | 15906859 | Gma19g01436 | 19 | 43631927 | 43634815 | PCT |