Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01410 ATGGCTCCTGGAAGCAGTGTTTTCAAAGAAGTTCTTGAATCTCACCTGATGTCTTCAGATTACGAAACGGGGAAAGCTAAATCTGAGGCCAAGAGTAACATTACATCCACAAAATCTAGCGTTGGGTTGAGTGGAAAGAGTGGAATTAGTTCAAACAATGGGGTGTATGAATTACTTGGATGCCCTGTTTGCAAGAATTTGATGTATCCCCCAATTCACCAGTGCCCAAATGGCCATACATTATGTTCCCATTGTAAAGTTGAAGTCCATAATATCTGCCCATCCTGCCATCATGATCTTGGGAATATAAGGTGTTTAGCTTTGGAGAAAGTGGCAGAATCATTGGAGCTTCCTTGCAGATATCAGAGTCTTGGTTGTCATGATATATTCCCGTACTATACTAAGCTGAAGCATGAGCAAAATTGCGGATTTCGTCCATACAATTGTCCCTATGCTGGATCTGAGTGCTCTGTGATGGGTGACATCCCTACTCTTGTTGCTCATCTCAAGGATGATCACAAGGTTGACATGCATGATGGATGTACCTTCAATCACCGATATGTCAAAGCAAATCCACATGAAGTTGAAAATGCCACATGGATGCTAACTGTTTTTAATAGTTTTGGAAGGCATTTCTGCTTGCACTTTGAGGCGTTCCAGCTTGGCTCAGCTCCAGTGTATATGGCATTTTTGCGATTCATGGGTGATGACAATGAAGCAAAGAAATTCAGCTACAGCTTGGAGAACGTAATTCTTCATCACAACTTTCCTGAGGTGATTCATTCGTTTACTGTGAATGGCTTATTGAGAGTGCAGCTAGAGCTAGGACTACTTGAAGTTATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGCGGGCCCCCGGCAAACCAATACCCAACTGCACCACCTAGAGGGGGTAGCACATACGGAGGAGGTAATGATAGAGGAGAGCCTAGGGGAAATGTTGCGAAGAGTGGTGCCCCGCAGAAAGTATTGCCGATTGAGATACCCTCTATGCCATTGGATGAATTAAACAGGTTAACAGGAAACTTTGGTACAAAGGCTTTTATTGGCGAAGGTTCTTATGGACGAGTTTACTATGCAAAATTGAGTGATGGTACTGATGCTGCAATTAAGAAGCTGGATACCAGTTCTTCCGCAGAACCTGACTCAGATTTTGCGGCTCAGTTATCGATTGTTTCAAGACTGAAGCATGACAATTTTGTGGAGTTGATTGGATATTGTCTAGAGGCAGATAACAGACTTTTGGTTTATCAATATGCAAGTCTTGGTTCTTTGCATGATGTGTTACATGGTAGGAAGGGTGTACAAGGGGCTGAACCTGGTCCAGTATTAAGTTGGAGCCAGAGAGCAAAAATTGCATTTGGTGCAGCTAAAGGTCTAGAGTTTCTTCACGAAAAGGTTCAGCCTTCTATTGTTCATCGCGATGTTAGATCTAGCAATGTCTTACTGTTCAACGACTATGAGGCCAAGATAGCTGATTTCAGCTTAACAAATCAGTCTTCTGACACAGCCGCCAGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCCCCAGAGTATGCCATGACAGGGCAGATAACCCAGAAAAGTGATGTTTACAGTTTTGGGGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGATCACACAATGCCCAAAGGACAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTTAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGACTATCCTCCAAAGGCTATTGCTAAGTTGGGTGCTGTGGCAGCACTTTGTGTTCAGTATGAAGCTGACTTCAGACCAAACATGACCATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCAGCTGGTCCCGACTCTCATGCTTGA 1938 0.437 MAPGSSVFKEVLESHLMSSDYETGKAKSEAKSNITSTKSSVGLSGKSGISSNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALEKVAESLELPCRYQSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSECSVMGDIPTLVAHLKDDHKVDMHDGCTFNHRYVKANPHEVENATWMLTVFNSFGRHFCLHFEAFQLGSAPVYMAFLRFMGDDNEAKKFSYSLENVILHHNFPEVIHSFTVNGLLRVQLELGLLEVMLCCGGAEEESSGPPANQYPTAPPRGGSTYGGGNDRGEPRGNVAKSGAPQKVLPIEIPSMPLDELNRLTGNFGTKAFIGEGSYGRVYYAKLSDGTDAAIKKLDTSSSAEPDSDFAAQLSIVSRLKHDNFVELIGYCLEADNRLLVYQYASLGSLHDVLHGRKGVQGAEPGPVLSWSQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLGAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPDSHA 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01410 645 SUPERFAMILY Protein kinase-like (PK-like) 332 630 IPR011009 -
Gma19g01410 645 ProSiteProfiles Zinc finger RING-type profile. 61 97 IPR001841 -
Gma19g01410 645 Gene3D Phosphorylase Kinase; domain 1 325 428 - -
Gma19g01410 645 Pfam Protein tyrosine and serine/threonine kinase 356 630 IPR001245 GO:0004672|GO:0006468
Gma19g01410 645 SUPERFAMILY TRAF domain-like 114 251 - -
Gma19g01410 645 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 169 IPR013083 -
Gma19g01410 645 PANTHER OS03G0226300 PROTEIN 281 644 - -
Gma19g01410 645 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 113 IPR013083 -
Gma19g01410 645 CDD RING-HC_SIAHs 61 96 - -
Gma19g01410 645 SMART tyrkin_6 352 630 IPR020635 GO:0004713|GO:0006468
Gma19g01410 645 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 170 267 IPR008974 GO:0005515
Gma19g01410 645 SUPERFAMILY RING/U-box 53 103 - -
Gma19g01410 645 MobiDBLite consensus disorder prediction 289 328 - -
Gma19g01410 645 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Gma19g01410 645 Pfam Seven in absentia protein family 103 248 IPR018121 GO:0005737|GO:0006511|GO:0007275
Gma19g01410 645 ProSitePatterns Tyrosine protein kinases specific active-site signature. 480 492 IPR008266 GO:0004672|GO:0006468
Gma19g01410 645 CDD STKc_IRAK 358 633 - -
Gma19g01410 645 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 281 644 - -
Gma19g01410 645 ProSiteProfiles Protein kinase domain profile. 352 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01410 645 ProSiteProfiles Zinc finger SIAH-type profile. 114 174 IPR013010 GO:0008270
Gma19g01410 645 Gene3D Transferase(Phosphotransferase) domain 1 430 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01410 Gma-Chr19 43355387 43363570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01410 1 248 C3H Transcription Factor Family AT2G41980 78.629 7.63e-141 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gma19g01410 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01410 - - gmx:100812507 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01410 19 43355387 43363570 Gma19g01410 19 43355387 43363570 ECH
Gma19g01410 19 43355387 43363570 Gma03g01347 03 39609844 39612800 GST