Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01402 ATGTCTTCTTTTACTTATTCCCTATTCACCACCATTTTCTTAGTGCTAACAATCTTTCTTCATCCATCAAATGCTCAACTGAGTTCAACCTTCTACTCCAGCACGTGCCCCAACGTGTCTTCCGTTGTGCGCAGTGTTGTTCAGCAGGCTCTGCAATCTGATCCTCGTATTGCTGCGAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGCGATGGATCCATTTTGTTAGACGTAGGTGGCAACATAACACTGAGCGAGAAAAATGCAGGTCCCAACAACAATTCAGCTCGTGGCTTTGATGTAGTGGACAACATAAAGACATCTGTTGAAAATTCATGCCCTGGTGTTGTATCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGCTTCTGTGTCTTTGGGAGGAGGTCCTTCATGGAACGTACAACTAGGAAGAAGGGACGGTTTGATTGCAAACCAATCTGGTGCCAACACATCCATTCCCAATCCAACTGAAAGCCTGGCCAATGTCACAGCCAAGTTTGCTGCAGTTGGCTTAAACGTAACTGATCTCGTTGCATTATCTGGTGCACACACTTTTGGCCGTGCGCAATGTAGATTTTTCAACCAGAGACTGTTCAACTTGAGCGGCACGGGTAGCCCTGATCCCACGCTGAACGCAACCTATTTGGCGACACTGCAGCAAAACTGTCCTCAAAATGGAAGCGGCAACACTCTGAACAACCTCGACCCTTCGTCCCCAGACACCTTCGACAACAACTACTTCCAAAACCTTCTCAGCAATCAGGGCCTTCTCCAAACCGACCAAGAGCTCTTCTCCACCAACGGCGCCGCCACAATCTCCGTTATCAACAACTTCGCCGCCAACCAAACCGCGTTCTTCCAAGCCTTTGCTCAGTCTATGATTAACATGGGTAATATTAGCCCGTTGACTGGAAGCCGGGGTGAAATCAGATCCGATTGTAAGAGGGTCAATGGAAGTTAA 996 0.4729 MSSFTYSLFTTIFLVLTIFLHPSNAQLSSTFYSSTCPNVSSVVRSVVQQALQSDPRIAASLTRLHFHDCFVNGCDGSILLDVGGNITLSEKNAGPNNNSARGFDVVDNIKTSVENSCPGVVSCADILALAAEASVSLGGGPSWNVQLGRRDGLIANQSGANTSIPNPTESLANVTAKFAAVGLNVTDLVALSGAHTFGRAQCRFFNQRLFNLSGTGSPDPTLNATYLATLQQNCPQNGSGNTLNNLDPSSPDTFDNNYFQNLLSNQGLLQTDQELFSTNGAATISVINNFAANQTAFFQAFAQSMINMGNISPLTGSRGEIRSDCKRVNGS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01402 331 Pfam Peroxidase 43 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 Gene3D Peroxidase, domain 2 165 308 - -
Gma19g01402 331 PANTHER PEROXIDASE 5 330 - -
Gma19g01402 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gma19g01402 331 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PANTHER PEROXIDASE 72-RELATED 5 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Gma19g01402 331 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma19g01402 331 Gene3D - 31 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01402 Gma-Chr19 43283990 43286250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01402 8 331 Peroxidase AT5G06720 73.148 1.10e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01402 K00430 - gmx:100810355 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01402 19 43283990 43286250 Gma19g01402 19 43283990 43286250 ECH
Gma19g01402 19 43283990 43286250 Gma03g01337 03 39539461 39542245 GST
Gma19g01402 19 43283990 43286250 Gma02g01583 02 32051917 32054251 PCT
Gma02g01583 02 32051917 32054251 Gma19g01402 19 43283990 43286250 PCT