Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01389 ATGGTCACTGAACTTGAAAATAATAGATGTATGGTCACTGGGCCTTGGACACTAGAGAGGAAAGAGCCCCCTCTACGTTCCCCTAATCTTTGCCCCCTTTCTCACTCCCTCCTCTTCACACATTTTCTTAGCTCTCTCCAACAATCCCTCTCGTTCACACTTTCAGATTGTGTGAAGATGGGGGCTGGTGGCCGAACTGCTGTTCCTCCTGCCAACAGGAAGTCAGAGGCTGACCCTTTGAAGCGGGTACCATTTGAAAAACCTCAGTTTAGTCTCAGCCAGATTAAGAAGGCCATTCCACCTCACTGTTTCCAGCGCTCTGTTCTCCGCTCATTCTCCTATGTTGTTTATGACCTCACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTCCACCTCCTTCCCGGTCCTCTCTCTTTCGTGGCATGGCCAATCTATTGGGCTGTCCAGGGTTGCATCCTTACTGGTGTTTGGGTCATTGCCCATGAGTGTGGTCACCATGCATTCAGTGACTACCAGCTGCTTGATGATATTGTTGGCCTTATCCTCCACTCCGCTCTCCTAGTCCCGTACTTTTCATGGAAATACAGCCATCGCCGTCACCACTCCAACACAGGTTCTCTTGAGCGAGATGAAGTATTTGTGCCAAAGCAGAAGTCCAGTATCATGTGGTACTCTAAATACCTTAACAATCCACCAGGCAGAGTCCTCACTCTTGCCGTCACCCTCACGCTTGGTTGGCCCTTGTACTTGGCTTTTAATGTTTCTGGAAGGCCTTATGATAGATTTGCTTGCCACTATGACCCTTATGGTCCCATTTACTCTGACCGAGAACGACTTCAAATATATATATCAGATGCAGGAGTACTTGCAGTATGCTATGGCCTTTTCTGTCTTGCCATGGCAAAAGGGCTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCATTGCTTGTGGTCAATGGATTTTTGGTGTTGATTACATTTTTGCAGCACACTCACCCTGCATTGCCACACTACACTTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTAGCAACAGTGGATAGAGATTATGGAATCCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCTCATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCGACAAAGGCAATAAAGCCCATCTTGGGAGAGTATTATCGGTTTGATGGGACTCCATTTGTCAAGGCAATGTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAGCCAGATCAAAGTACTCAGAGCAAAGGTGTATTTTGGGCGAGGTTGGCACACGTTGCCCACTTTGTTAGCGGCGGCGTCGCCACCCCTACCGGCGCCGACCATATTATGCAGTTAAGAGCGGTGACCCCAATGAAACGTTTCGGGACGATTATGCAGGTCTCACCACTTCATGTGCTCTGCAACTTAGATGCGGGATCACCAATGATTCTTCTCAATATTGCTACAAAGAGAAATTTTCTTGCCAAGTCGAAAGAAACAAACAATTGGAGCGAGGCAAGTGTTCCCGCCATGGGAATGGAGCGAGTGCAGTGTGCCTATGCCTCTCTGGACGAAGCGTTCGAAATAGGGAAAGAGACGTATCAGGGTCAGCAATACAGCCAGATTTACTTCGCGCGCCTTCATTTGATGCGAACACTCTTGTATTCCCTCATTCCTCATTGGAAACCCAATTCTCCCGTGTGCACGGTGCTGGGATTGGAAGAGGGCAAGGAGTGTGTCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATTCTTGATGAGTATTCTAAGGAGAGATCAGTGGTTCCACTCGTCAAGCCACATAACTTCATACACCCGGATGATCACCTAGTTTTGGAAGATGAAAGTGGGCGGGTTAAGCTCAGTGGGTATATCATTTCGCCATCTGAATATGTAACAGGAATTGTGGTTGCTTTACTTGGAAAGGAAACGGGGGCAGGCGACTTTTTGGTTCAGGATGTCCTACAAGCTGGCTTACCACCACAGATAGAATTTCCCCTTAAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGGTTAAGTGTTGGGAGCAGCAGCTCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACAGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCACAAATTGCTCAAGTTGTCTTTGCTGGAAATTTAATTGAGATACCTCACAGACTTCTTAATGGACAGAATTTGGCTTCAAAGGATCTCTCAAGAATGGCTGAGCCAATAAAGGAGCTAGATATTCTGTTGAGTCAGATAGCTGCTGGTTTGCCTTTGGATATCATGCCAGGACCCAGTGACCCTGCTAATTTCTCATTACCACAGCAGTCATTGCATAGATGCCTTTTCCCTGGGTCGTCAACGTATAATACTTTTAGATCTTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCCGGCCAAAATGTAGATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACTGCACCTAATACTCTTGGATGCTATCCTTATACTGATAAGGATCCTTTCTTCATTGAGAGCTGTCCTCATGTTTACTTTATTGGAAATCAAGATAAATTTGAAACTCGTGTCATAAAGGGATCAGAAGGGCAGTTGGTGAGACTCGTATGTGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGCTAAATCTGAGGGACCTTGATTTTGTTGTGGTATTTAAATTTGTTTTGGAAGTTTGTTCATG 2867 0.4531 MVTELENNRCMVTGPWTLERKEPPLRSPNLCPLSHSLLFTHFLSSLQQSLSFTLSDCVKMGAGGRTAVPPANRKSEADPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPLSFVAWPIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSSIMWYSKYLNNPPGRVLTLAVTLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVCYGLFCLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDGTPFVKAMWREARECIYVEPDQSTQSKGVFWARLAHVAHFVSGGVATPTGADHIMQLRAVTPMKRFGTIMQVSPLHVLCNLDAGSPMILLNIATKRNFLAKSKETNNWSEASVPAMGMERVQCAYASLDEAFEIGKETYQGQQYSQIYFARLHLMRTLLYSLIPHWKPNSPVCTVLGLEEGKECVIVGTLYKHMKLKPCILDEYSKERSVVPLVKPHNFIHPDDHLVLEDESGRVKLSGYIISPSEYVTGIVVALLGKETGAGDFLVQDVLQAGLPPQIEFPLKSREDKYVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDEKEQSIASQIAQVVFAGNLIEIPHRLLNGQNLASKDLSRMAEPIKELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSTYNTFRSCTNPHCFELDNVRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFFIESCPHVYFIGNQDKFETRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDLDFVVVFKFVLEVCS 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01389 955 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 60 439 - -
Gma19g01389 955 Pfam Fatty acid desaturase 145 403 IPR005804 GO:0006629
Gma19g01389 955 Pfam Domain of unknown function (DUF3474) 87 125 IPR021863 GO:0016717
Gma19g01389 955 CDD Delta12-FADS-like 106 388 - -
Gma19g01389 955 PANTHER OLEATE HYDROXYLASE FAH12 60 439 - -
Gma19g01389 955 Pfam DNA polymerase delta subunit OB-fold domain 549 676 IPR040663 -
Gma19g01389 955 Gene3D - 688 951 - -
Gma19g01389 955 Pfam DNA polymerase alpha/epsilon subunit B 697 907 IPR007185 GO:0003677|GO:0006260
Gma19g01389 955 Gene3D - 556 679 - -
Gma19g01389 955 CDD MPP_PolD2_C 711 942 IPR041863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01389 Gma-Chr19 43189516 43202609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01389 525 942 Core DNA Replication Machinery Family AT2G42120 76.316 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01389 K02328 K10256 gmx:100805951 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01389 19 43189516 43202609 Gma19g01389 19 43189516 43202609 ECH
Gma19g01389 19 43189516 43202609 Gma03g01327 03 39453055 39461165 GST