Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01379 ATGTTCCTCTTTCGAAAATTCAACGTTCATAGCCTCATCCTTAAACCCTGGCAAAACCCTAGGTTCCTGAGCACGAAGAAGAAACCCCCGAAATCCGGTACCAAATTCATCGGAAAAGCCGCCCTCAAAGAAGCCCAAGCCGCACTTCTCGAGTACCTCCACTCCACACGAAGCCTCAACATCGTCGACGCCGAAAACATGTGCAGAAACTCACCCTCCTTCCTCCACGACCTCCTCGCCAAATCCCAATCCCAAACCCTAACGCGGCACGTCGACAACAACAACAACAACAACAGCAGCAGCAGCAGCAGCACCACCACCACCACCAAACGCTCCATCTCGCGCTACCTCCGCTACCACCCCATCAACGAGTTCGAGCCCTTCTTCGAGAGCGCCGGCCTCACCCCTCCCGAGTACGCGCCCTTTCTCCCGCGCGACATGATTTACCTAAACGACGACGCTTTGCTCATGGAGAATTACCATGCCCTCTGCAATTACGGCGTTCCCCGCACCAAGATGGGGAGGCTTTTCAAATTGACGCCTCAGTTGTTTCGTTACAAACCCGGCGTTTTGATCTCGAAGCTTCGGGATTACGAAAAGCTCGGTGTTGCGCGGAGGACTTTGGCGTGTGTGGTTGCTTCTAGCCCCTGCATTTTGGTTGGGGGTGTTGATGTTGGTTTTGTTAAGGTTGTGGAGAAGTTGAAGGGTGTTGTTGGAAAGGATGTTGATTGGATTGGGGAGAATTTGTTGGATATGTTGAGCGATCAGGGTTGTTGTGATTGGAGGATAGTGCTTCATGTTTTGTGTTTGCTTGATAGGGTTTATAGTGAGGAACAGTTGGGCGATTTTTTCATTCGTCACCCTAGTGTTGTTTTTGAGGACTCTGGAGGAAGTGTGTTGTCTCTGATTAACTTTTTGTTTAAATTTGGGTTGTCTCTGGACCAGGTTTCTCTCATGCTTCTCGAGTTTCCAAAGATTCGGGTCACGAAGTTTTTGTCCAACTTGAGGCAGTGTTTTCTGTTCTTGACCGAGATTGAGATGGAGGCATTGGAGATTGGGGAGATTTTGCAGTCTCAGTGCTTGGTGTTGGGTTCCTTCACTTTGAAGAAAACGATTACTTTGCTTACTAACTTGAATGCTGGCAAGAAGCGGTTGTGTAGAGTTGTGAGGGATGATCCTCTGGTAATGAAGAGTTGGGCTCTGGGAAGGAGGATTCAGCCTTTCGTGAACTCATATTTGGAGTATGAATCAAAGGAGCAGAAGAAGAAGTTCATGCTCAAGTTGGGGTATGTGGAGAACTCAAAGAAGATGAATGAGACGATTAGGTTGTTCAGAGGTAAGGGAGCTGAGCTTGAGGAGAGACTTGATTTTATTGTTAAGGCTGGGTTGGATTATGAGGTTGTCTGTAAGATGATTCGAGATTCCCCGCGGATTCTTAATCAGACAACCGATAGGATCAACATGAAAATTGAGAATCTTGTGAGTTTAGGATATTCTATATCGGATTTAGCTAGTTTTCCTTCATTTCTTTCCTATTCACCTCGAAGGGTTAAGCTTCGGTTTTTGATGTATGATTGGCTCAAAGAGCATGGAGCTGTAGAAGCGGGGCTTGCTTTGAGCACTATAATTGCATGCTCTGATAAAGCGTTTGAGAAGCTAAATTTGATTCAAGATAGGAGATTTCTTATAGAGAAATTTTAG 1701 0.465 MFLFRKFNVHSLILKPWQNPRFLSTKKKPPKSGTKFIGKAALKEAQAALLEYLHSTRSLNIVDAENMCRNSPSFLHDLLAKSQSQTLTRHVDNNNNNNSSSSSSTTTTTKRSISRYLRYHPINEFEPFFESAGLTPPEYAPFLPRDMIYLNDDALLMENYHALCNYGVPRTKMGRLFKLTPQLFRYKPGVLISKLRDYEKLGVARRTLACVVASSPCILVGGVDVGFVKVVEKLKGVVGKDVDWIGENLLDMLSDQGCCDWRIVLHVLCLLDRVYSEEQLGDFFIRHPSVVFEDSGGSVLSLINFLFKFGLSLDQVSLMLLEFPKIRVTKFLSNLRQCFLFLTEIEMEALEIGEILQSQCLVLGSFTLKKTITLLTNLNAGKKRLCRVVRDDPLVMKSWALGRRIQPFVNSYLEYESKEQKKKFMLKLGYVENSKKMNETIRLFRGKGAELEERLDFIVKAGLDYEVVCKMIRDSPRILNQTTDRINMKIENLVSLGYSISDLASFPSFLSYSPRRVKLRFLMYDWLKEHGAVEAGLALSTIIACSDKAFEKLNLIQDRRFLIEKF 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01379 566 PANTHER CGI-12 PROTEIN-RELATED 28 552 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 SMART mt_12 469 499 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 SMART mt_12 317 348 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 SMART mt_12 500 533 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 SMART mt_12 174 204 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 SMART mt_12 209 241 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 Pfam mTERF 435 551 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 Pfam mTERF 276 412 IPR003690 GO:0003690|GO:0006355
Gma19g01379 566 Gene3D Transcription termination factor 3, mitochondrial 297 555 IPR038538 -
Gma19g01379 566 Gene3D Transcription termination factor 3, mitochondrial 100 295 IPR038538 -
Gma19g01379 566 MobiDBLite consensus disorder prediction 89 110 - -
Gma19g01379 566 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01379 Gma-Chr19 43085454 43092726 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma19g01379 mTERF 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01379 - - gmx:100807690 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01379 19 43085454 43092726 Gma19g01379 19 43085454 43092726 ECH