Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01375 ATGAGTTCAGCTTTGAAAGCCTACTTCACTGGCACAGATATGAGTGACAAACTATCTCGTACAATGGCAGGAACTGGTTTCTCCACCTCCTGTCTTTCCTCTTCCAGCAACTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACCTGGAACTGTAAGGAGAAGATTGTCATTAATAAAAGCAGAAGTGAAGTATGTGAACGCTGAAAAGGCTAAGGAACTTGTGGAAGCTGATGGATATACTGTTCTTGATGTGCGGGACAAAACTCAGTTTGTGCGAGCTCACATAAAATCTTGTTCTCATGTGCCTCTTTTTGTTGAAAACAAAGACAATGATCCCGGTACTATTATAAAAAGGCAGCTGCACAATAATTTTTCTGGGTTGTTCTTTGGGTTACCATTCACTAAGCCAAATCCTGAGTTTGTGCAATCTGTTAAGAGCCAGTTTCCGCCTGAAAGTAAACTCTTGGTTGTATGTCAGGAAGGACTGAGGTCTGCTGCAGCAGCAAGTAAGTTAGAAGAAGCTGGTTTCGAAAATATAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGGACTTTTGATTCTGTAGGGTCTACAGAGTTGGAGAATGCCGGCAAAGCTGGCTTGGTGACAATCCAAGGAAAAATCTCAACTGTGCTGGGAACTATTCTTGTTTGTGCATATATATTCGTTACCTTCTTCCCTGACCAAGCAGAGAAGCTATTCCAATTGGCCCCTACAGGCTAA 780 0.4269 MSSALKAYFTGTDMSDKLSRTMAGTGFSTSCLSSSSNLGTCWLVLKTHNARAVPGKLPGTVRRRLSLIKAEVKYVNAEKAKELVEADGYTVLDVRDKTQFVRAHIKSCSHVPLFVENKDNDPGTIIKRQLHNNFSGLFFGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASKLEEAGFENIACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQGKISTVLGTILVCAYIFVTFFPDQAEKLFQLAPTG 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01375 259 Coils Coil 67 87 - -
Gma19g01375 259 Pfam Rhodanese-like domain 77 197 IPR001763 -
Gma19g01375 259 ProSiteProfiles Rhodanese domain profile. 85 208 IPR001763 -
Gma19g01375 259 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 70 197 IPR036873 -
Gma19g01375 259 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Gma19g01375 259 CDD RHOD 80 200 - -
Gma19g01375 259 SMART rhod_4 75 205 IPR001763 -
Gma19g01375 259 Gene3D - 62 203 IPR036873 -
Gma19g01375 259 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 22 258 IPR044615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01375 Gma-Chr19 43038699 43042766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01375 28 253 Sulfurtransferasese or Rhodanese AT2G42220 69.027 9.50e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01375 - - gsj:114398290 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01375 19 43038699 43042766 Gma19g01375 19 43038699 43042766 ECH
Gma19g01375 19 43038699 43042766 Gma03g01311 03 39293546 39296962 GST