Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g01368 | ATGGCTTCTTCAAAGACCACCAACCCAACAACAACTACTACACAATTGGAACCACTCCCACCACCTCAACAACGCCATCCTCCTCCTCCTCATCATCAGTTGCAACAACACCACCACCACCACCATCATCATCAACAAATTCATGACCATCATCAAATTTCTTTTGGAATGATGCAATCCTCTTCTTCATTTTCCTCTATCCCCGGAAACTACCTcagaagcaaggattccggagcttatgactTGGGTGAATTGGATCAAGCCTTTTTCCTCTACCTTGATGGACAAGCAGACCCTTCTAGTGTTCAAGACCAAAGACAAAACTCATCATCAGGAATGAGGCCTCCAACTCTCAACATTTTCCCCTCTAAGCCTATGCATGTAGAGCCATCATCATCCAAGGCCAAGGCTAACATAGAGCTAGTTTCTCCACAAACAAGTGGATCAAAGAGGCCATCAGAGCCGTCGATGGAGTTGGCCAACCCTCGAAACGAAACTGCTTCTGCCCCTCAGCCACCCAAACCTGTCAAGCGAGAGAGCAACCGCAAAGGTCCAACGTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAACTAGAGTCGAGTAGGATTAGGCTGAATCAGCTGGAACAAGAGCTACAACGTGCTAGAACTCAGGGCATGTTCTTGGGTGGAGGCGCACTTTTGGGTGGAGAGCAAGGCCTTCCTGTCACTATGAATACTATTAGCACGGAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCAAGAGGAGCACCACCGCATAGTGTGTGAGCTAAGAGCTGCAGTGCAAGAGCACCTTCCTGAAAACGAGCTTAGACTGTTTGTGGACAATTGTTTGGCGCATTATGATCAAGTGATGAACCTCAAGAGCTTAGTGGCCAAAACAGATGTGTTCCATCTTGTTTCTGGCACGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGTTTCAGGCCATCTGAACTCATCAAGATTATTGTGCGTCAAATTGAGCCTCTCACGGAGCAACAAATATTGGGCATATGTGGATTGCAACAATCTACACAAGAAGCAGAAGAGGCTCTCTCCCAAGGGCTCGAGGCTCTTAATCAATCTCTCTCAGACACTATAACATCAGATTCTCTTAGTTATCCTCCCAATATGGCTAACTATATGGGACAGATGGCTGTAGCCATGAACAAGCTCTCCACTCTTGAAGGTTTCGTGAGACAGGCTGATAATCAGAGGCACCAAACCATTCACCGTCTGCACCAGATCCTAACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCTGAGTACTTCCATCGTCTTCGAGCCCTCAGTTCTTTGTGGCTGGCACGCCCTCGCCAAGAATAG | 1476 | 0.4641 | MASSKTTNPTTTTTQLEPLPPPQQRHPPPPHHQLQQHHHHHHHHQQIHDHHQISFGMMQSSSSFSSIPGNYLRSKDSGAYDLGELDQAFFLYLDGQADPSSVQDQRQNSSSGMRPPTLNIFPSKPMHVEPSSSKAKANIELVSPQTSGSKRPSEPSMELANPRNETASAPQPPKPVKRESNRKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARTQGMFLGGGALLGGEQGLPVTMNTISTEAAMFDVEYARWQEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGTWKTPAERCFMWIGGFRPSELIKIIVRQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDTITSDSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADNQRHQTIHRLHQILTTRQAARCFLAIAEYFHRLRALSSLWLARPRQE | 491 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g01368 | 491 | Pfam | bZIP transcription factor | 200 | 233 | IPR004827 | GO:0003700|GO:0006355 | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 136 | 167 | - | - | |
Gma19g01368 | 491 | SUPERFAMILY | Leucine zipper domain | 200 | 242 | IPR046347 | GO:0003700|GO:0006355 | |
Gma19g01368 | 491 | SMART | brlzneu | 196 | 269 | IPR004827 | GO:0003700|GO:0006355 | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Gma19g01368 | 491 | ProSiteProfiles | DOG1 domain profile. | 273 | 487 | IPR025422 | GO:0006351|GO:0043565 | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Gma19g01368 | 491 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 203 | 218 | IPR004827 | GO:0003700|GO:0006355 | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 176 | 203 | - | - | |
Gma19g01368 | 491 | Coils | Coil | 219 | 246 | - | - | |
Gma19g01368 | 491 | Pfam | Seed dormancy control | 291 | 365 | IPR025422 | GO:0006351|GO:0043565 | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 98 | 117 | - | - | |
Gma19g01368 | 491 | PANTHER | BZIP TRANSCRIPTION FACTOR TGA10 | 87 | 490 | - | - | |
Gma19g01368 | 491 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 87 | 490 | - | - | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 98 | 203 | - | - | |
Gma19g01368 | 491 | Gene3D | - | 199 | 249 | - | - | |
Gma19g01368 | 491 | MobiDBLite | consensus disorder prediction | 31 | 48 | - | - | |
Gma19g01368 | 491 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 198 | 242 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g01368 | Gma-Chr19 | 42971459 | 42978211 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g01368 | 69 | 491 | Basic region leucine zipper (bZIP) Transcription Factor Gene Family | AT5G06839 | 65.766 | 0.0 | 560 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gma19g01368 | DOG1 | 1.7e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma19g01368 | K14431 | - | gmx:100799713 | 853.203 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma19g01368 | 19 | 42971459 | 42978211 | Gma19g01368 | 19 | 42971459 | 42978211 | ECH | |
Gma19g01368 | 19 | 42971459 | 42978211 | Gma03g01307 | 03 | 39238086 | 39246234 | GST | |
Gma19g01368 | 19 | 42971459 | 42978211 | Gma02g01649 | 02 | 34194365 | 34202492 | PCT | |
Gma02g01649 | 02 | 34194365 | 34202492 | Gma19g01368 | 19 | 42971459 | 42978211 | PCT |