Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01358 ATGCCAATGCACCATCTTCTCATTTCCTTCCTTATCTTCTCTCTCACTCCTACTCCGACAACCTCCCTCAACTCCGACGGCCTCTCCCTGCTTGCCCTGAAAGCCGCCGTGGACTCCGACCCCACCGGAGTTCTTTCCTCCTGGTCGGAAACCGACGGCACCCCATGCCACTGGCCGGGAGTCTCCTGCTCCGGCGACAAAGTAAGCCAAGTTTCCCTCCCAAACAAGACCCTGAGCGGTTACATCCCCTCCGAGCTGGGCTTCTTAACCTCCCTCAAAAGACTAAGCCTTCCCCACAACAACTTCTCAAACGCGATTCCCCCTTCTCTCTTCAACGCCACGTCACTCATCGTTCTCGACCTCTCTCATAACTCTCTCTCCGGTTCCCTCCCTACAGAGCTTCGCTCCCTCAAGTTCCTCCGCCACGTGGACTTATCCGATAACTCCCTCAACGGTTCCCTCCCCGAAACCCTCTCCGATCTCACCTCCCTCGCCGGAACCCTCAATCTTTCCTTCAACCACTTCTCCGGCGGGATTCCGGCGTCCCTCGGTAACCTTCCGGTGTCCGTCAGCCTTGACCTCCGCAACAACAACCTCACTGGGAAAATCCCACAGAAAGGGTCCCTTTTGAACCAGGGTCCCACCGCGTTTTCTGGTAACCCTGGATTGTGCGGGTTCCCGTTGCAGAGCGCTTGCCCTGAAGCGCAAAAGCCTGGAATTTTCGCGAACCCTGAAGATGGGTTCCCTCAGAACCCTAATGCGCTTCACCCTGATGGGAATGATCAGAGAGTGAAGCAGCACGGTGGCGGGTCTGTTGCTGTTCTTGTTATCTCCGGGCTCTCCGTAGCGGTTGGGGCGGTTTCGCTTTCTTTGTGGGTTTTCCGGCGACGGTGGGGCGGCGAGGAAGGGAAATTGGGAGGGCCAAAGTTAGAAAATGAAGTGGATGGGGGAGAGGGGCAAGAGGGTAAATTTGTTGTTGTGGATGAAGGGTTTGAGTTGGAGTTGGAGGATTTGCTGAGGGCGTCTGCGTATGTTATTGGGAAGAGCAGGAGTGGGATTGTGTACAAGGTTGTCGGTGTCGGAAAAGGGTCCTCCTCCGCGGCAGGGGCGGCGAATGTGGTGGCTGTTCGAAGACTCAGCGAGGGTGATGCCACGTGGCGGTTCAAGGAATTTGAGTCCGAGGTTGAGGCCATTGCCAGGGTTCGTCACCCCAATGTTGTACCTTTGAGAGCTTATTACTTTGCGCATGATGAGAAGCTGCTTATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCCTTACATGGTGGGCCTTCCAATTCATTGCCACCAATATCATGGGCAGCAAGGTTAAAAATAGCTCAAGAAGCAGCAAGGGGCTTGATGTATATACACGAGTTCAGTGGTCGAAAATATATCCATGGCAACATAAAGTCAACAAAAATATTGCTGGATGATGAGCTCCATCCATACGTGTCAGGTTTTGGACTTGCTCGGCTCGGTTTGGGCCCAACAAAGTCTACTACAATGGCACCAAAACGAAACAGCTTGAACCAGTCTTCTATAACAACTGCAATAAGTTCAAAGGTTGCAGCTTCCTCTAACCACTACTTGGCACCTGAGGTTCGCTTTACCGGTGGCAAGTTCACACAGAAATGTGATGTATATTCTTTTGGTATAGTGCTGTTAGAACTTTTGACAGGTAGGATGCCAGATTTTGGACCAGAAAATGATGATAAGGTACTAGAGAGTTTTGTAAGGAAAGCATTCAAGGAGGAGCAGCCATTGTCTGATATCATAGACCCAGCACTTATCCCTGAAGTTTATGCTAAGAAGCAAGTCATTGCTGCATTCCATATCGCTTTGAACTGCACTGAACTCGATCCAGAGTTGCGACCTAGAATGAAAACTGTGTCAGAAAGCCTTGATCACATCAAAATTTAG 1947 0.5126 MPMHHLLISFLIFSLTPTPTTSLNSDGLSLLALKAAVDSDPTGVLSSWSETDGTPCHWPGVSCSGDKVSQVSLPNKTLSGYIPSELGFLTSLKRLSLPHNNFSNAIPPSLFNATSLIVLDLSHNSLSGSLPTELRSLKFLRHVDLSDNSLNGSLPETLSDLTSLAGTLNLSFNHFSGGIPASLGNLPVSVSLDLRNNNLTGKIPQKGSLLNQGPTAFSGNPGLCGFPLQSACPEAQKPGIFANPEDGFPQNPNALHPDGNDQRVKQHGGGSVAVLVISGLSVAVGAVSLSLWVFRRRWGGEEGKLGGPKLENEVDGGEGQEGKFVVVDEGFELELEDLLRASAYVIGKSRSGIVYKVVGVGKGSSSAAGAANVVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYFAHDEKLLITDFIRNGSLHTALHGGPSNSLPPISWAARLKIAQEAARGLMYIHEFSGRKYIHGNIKSTKILLDDELHPYVSGFGLARLGLGPTKSTTMAPKRNSLNQSSITTAISSKVAASSNHYLAPEVRFTGGKFTQKCDVYSFGIVLLELLTGRMPDFGPENDDKVLESFVRKAFKEEQPLSDIIDPALIPEVYAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDHIKI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01358 648 Gene3D Transferase(Phosphotransferase) domain 1 426 648 - -
Gma19g01358 648 Gene3D Ribonuclease Inhibitor 167 234 IPR032675 -
Gma19g01358 648 SUPERFAMILY L domain-like 26 229 - -
Gma19g01358 648 SUPERFAMILY Protein kinase-like (PK-like) 345 643 IPR011009 -
Gma19g01358 648 ProSiteProfiles Protein kinase domain profile. 340 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01358 648 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Gma19g01358 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 647 - -
Gma19g01358 648 Pfam Protein tyrosine and serine/threonine kinase 346 643 IPR001245 GO:0004672|GO:0006468
Gma19g01358 648 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 9 647 - -
Gma19g01358 648 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Gma19g01358 648 Gene3D Phosphorylase Kinase; domain 1 324 425 - -
Gma19g01358 648 Gene3D Ribonuclease Inhibitor 23 166 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01358 Gma-Chr19 42898441 42901962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01358 23 647 Receptor kinase-like Gene Family AT3G57830 59.155 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma19g01358 PK_Tyr_Ser-Thr 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01358 - - gmx:100796011 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01358 19 42898441 42901962 Gma19g01358 19 42898441 42901962 ECH
Gma19g01358 19 42898441 42901962 Gma03g01301 03 39185336 39188807 GST