Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01351 ATGGTACCACCAACCATGTTGTCCACTCAAGAAGGCACGTCGAGGAATATGACTCAATTTGACTCATCAGTGATACTCCATCACCTTGTGAATCTACAGGTTGGGAGTTCTTCTCAAGGGCCAAGGAACAATTTGGCTTGTTGTTCATCCCAAAAATGTCACATCTCATTGGTATTAGAGGGAATACTTGATGAAAAATACATAGAAGAATGTCTAATCCCATCCAAAATATTGTCGCACAAACATGAGCCCTATGCAATGAATGAGAATGATCGAAGACAACATGGAGGGCATCGTAGTTTGAGTGAAATAATTCGTAGAGGGAAGAGTGTATATCGAGGAGTAATCAAGTGCAACTACCAGCGTTTCGAAGCATTTGTGTGGGATAACTCCGATCCAGGGAAGAGAGGAAGACCAGGTGCTTATTCTACTGAAGTTGACGCCGCCAAAGCCCATGATTTAGTGTCGGTGAAGATTGGGGGCTTAAATGCATTAACGAATTTTCCTGTGAGATGCTATTCGAAGGAAATGGACGAGATGCGATGGATGAGCACAAGGGATTATATTTCAGCTGTTAGATGGACGGGCAAGGACTATAGTGACGGTGACTCTCCTTACCGTGGCGTCTACAGATCATACATGGTCCCAATAGGCAAGAAATGGGAAGCGAGGCTGGGTCGTGAGGGTTCACCAAACTTGCACTTGGGAACTTATTACACTCCGGAGGATGCAGCCAGAGCTTTTGATATTATTTCAATAAAAATAAAGGGAAGGGACGCCATTACCAATTCCGATTTGAACAGTTATGAGGTGGATGGCATTATGAAGAGCCAAATTACAACAGCAATGGATGGGTCGATTACTTTGAAGGTAGATGGAGTCGACAACGAAACTGAAGCATATCCCCCTCAAACTCAAAGCGTATTCCAGCACAATCATCAACAATTCATCAACTCATCATCCTTTTCTCGTCGCTATCAAAACCACAATCTCTTTTCAAGCAACCCTTATGCTCTTGGTGGTTTTATTGGCGGTGTTGGAAGTAGTGGCAGTGGCAATGCATATGGCAATTCAATTGTTAACCTTGCAGCACAGACTGCACAGTTTACAAATCAGAATGATACACTGCAACAGCCACTTCAGACTCAGCAGAGCCAAGTGAATGTTAACAATTTCAATCAGAATATACGCAGCAACAACATCAACAACAACAACAAACAGTTTCTGTCTCAGGATTCTAACCGTTCTGTGCTTTCTCATGCCCCCCAAAATCTTAATTTGGATAAGTGTGTCCCTTTCCCTGATTGGCCATCTGGTTTTGGCTTGCTAGGGGGGAACTTGGAATTGGAACCTTTAAGAAATATTAATTCCCTGAATGTGCAACCTCTAGAACAAGTCATGGTGAATGAAAGTACAGGAGCAACAAACGGTGTTTCTTCATTAGGGACACAAATCCAACCAGTGGAACCATCTAATCAGGAATTTGGAGCTACACAGCTACCGTTTCTTGAAGTGAACCAAAGTTTTGAGCCTTACAACTTCCAAGCCAATACTTTGAACCAGATACCACATGGGAACTTAAACTCCAGCCTTTCTGATAGTTTTCAGAACCCTAGTTCTGAAACAAACAACAATGGTTCCCCAGGTGAGACCAGTGGATGTCCAATTGATTTGGACATGAGAGATTATCTCAACAGATCTTATATAGAAGACAAAGATTTTGCTTGTGATTTTGACATGTTTGGAGCATTAGTGAATGAGGATAGACAAGGCCTCTAG 1779 0.425 MVPPTMLSTQEGTSRNMTQFDSSVILHHLVNLQVGSSSQGPRNNLACCSSQKCHISLVLEGILDEKYIEECLIPSKILSHKHEPYAMNENDRRQHGGHRSLSEIIRRGKSVYRGVIKCNYQRFEAFVWDNSDPGKRGRPGAYSTEVDAAKAHDLVSVKIGGLNALTNFPVRCYSKEMDEMRWMSTRDYISAVRWTGKDYSDGDSPYRGVYRSYMVPIGKKWEARLGREGSPNLHLGTYYTPEDAARAFDIISIKIKGRDAITNSDLNSYEVDGIMKSQITTAMDGSITLKVDGVDNETEAYPPQTQSVFQHNHQQFINSSSFSRRYQNHNLFSSNPYALGGFIGGVGSSGSGNAYGNSIVNLAAQTAQFTNQNDTLQQPLQTQQSQVNVNNFNQNIRSNNINNNNKQFLSQDSNRSVLSHAPQNLNLDKCVPFPDWPSGFGLLGGNLELEPLRNINSLNVQPLEQVMVNESTGATNGVSSLGTQIQPVEPSNQEFGATQLPFLEVNQSFEPYNFQANTLNQIPHGNLNSSLSDSFQNPSSETNNNGSPGETSGCPIDLDMRDYLNRSYIEDKDFACDFDMFGALVNEDRQGL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01351 592 SMART rav1_2 205 271 IPR001471 GO:0003700|GO:0006355
Gma19g01351 592 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Gma19g01351 592 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Gma19g01351 592 MobiDBLite consensus disorder prediction 525 554 - -
Gma19g01351 592 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 87 373 - -
Gma19g01351 592 SUPERFAMILY DNA-binding domain 205 263 IPR016177 GO:0003677
Gma19g01351 592 SUPERFAMILY DNA-binding domain 110 170 IPR016177 GO:0003677
Gma19g01351 592 ProSiteProfiles AP2/ERF domain profile. 205 265 IPR001471 GO:0003700|GO:0006355
Gma19g01351 592 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 87 373 - -
Gma19g01351 592 MobiDBLite consensus disorder prediction 525 551 - -
Gma19g01351 592 Gene3D AP2/ERF domain 111 171 IPR036955 GO:0003700|GO:0006355
Gma19g01351 592 Gene3D AP2/ERF domain 205 266 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01351 Gma-Chr19 42811184 42814553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01351 99 277 AP2-EREBP Transcription Factor Family AT1G51190 38.830 2.15e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01351 K09285 - pvu:PHAVU_001G137500g 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01351 19 42811184 42814553 Gma03g01296 03 39109119 39111448 GST