Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01315 ATGATAAGTCCCACCGACAAAGTCCTCGTTGCCTTCTCTGGTGGCCCTTCTTCCAGGGTAGCTTTGCAATTTGTGCATGACATGCAAGAGAGGGCTCAGAGGAACTTTGATGCGAGTAGGGATCGGTCGTTGCCGGTTTTTGGTGTTGGAGTTGTGTTTATTAATGAGAGTACCGTGCTGCCGATTCCTTCTAATGAAATGGAGGAAGCGGTTGGAGTTGTTAGAGAGGATAGCCAAGGTAGTGATCCGACGGGAAGGGAGGATGTGTTGCTCTGTCTGCGAATGTTGGCACTGCAAAAGGTTGCTTCTGAATTTGGGTATAACAGGATCATTCTGGGGTCATGCATTTCGAGGATTGCTTGCCATGTCATTTCAGCCACTGTGAAGggtcaaggatactcattacctgcagatatacagtatgttgatgctagatgggaagttcctgttgtgcttcctctgcgtgattgttttgcccaagagatcaacatgctatgccgccttgatggTCTAAAGACTGTAAAGTTGTCTACAGATCTGTGCTCTAGCATTAATGGCCTGGTATCATCTTTTGTGGCTTTGTTGCAGGAAGAAAACCCATCTCGAGAGAGCTCAATTGTAAGAACAGCTGGTAAACTTACTCCCTTCCAATTCAACAGGATTCCAGAGATCATTGATAGTAATGTTCCTTTGACAACTCGAAGATGCCAGAAGAGATATAATCTCAAATCCAATGAATCTGTTTCCTCAGAATCCTTCTGTCCTCTCTGCAACAGCCCACTCGACAAGAGTGAGATTGTTGATTGGAGTAATATTGATAGCCACAGAAGTAGTGATATTTTTTATAATACCTGCTGTTCAAGTTGTCGGTTTCAGATACTTCCAAGTGATTCCACAACAATGGAACAATTTTATATGGATTTTCCTCAGTCAGTGGTCAGCCGACCAAAGCAAGCCAACAATGGTAATTTGAGTCTGCTAAGGAACTTTATGTGTCGACCTTTCTTCAAGACATGA 1017 0.3835 MISPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDASRDRSLPVFGVGVVFINESTVLPIPSNEMEEAVGVVREDSQGSDPTGREDVLLCLRMLALQKVASEFGYNRIILGSCISRIACHVISATVKGQGYSLPADIQYVDARWEVPVVLPLRDCFAQEINMLCRLDGLKTVKLSTDLCSSINGLVSSFVALLQEENPSRESSIVRTAGKLTPFQFNRIPEIIDSNVPLTTRRCQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNIDSHRSSDIFYNTCCSSCRFQILPSDSTTMEQFYMDFPQSVVSRPKQANNGNLSLLRNFMCRPFFKT 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01315 338 Pfam Cytoplasmic tRNA 2-thiolation protein 2 183 273 IPR019407 GO:0000049|GO:0002098|GO:0034227
Gma19g01315 338 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 1 75 IPR019407 GO:0000049|GO:0002098|GO:0034227
Gma19g01315 338 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 81 329 IPR019407 GO:0000049|GO:0002098|GO:0034227
Gma19g01315 338 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 213 - -
Gma19g01315 338 Gene3D HUPs 1 281 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01315 Gma-Chr19 42407927 42412016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01315 K14169 - gmx:100804325 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01315 19 42407927 42412016 Gma19g01315 19 42407927 42412016 ECH
Gma19g01315 19 42407927 42412016 Gma03g01268 03 38711000 38719130 GST