Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01307 ATGGCTTCGTCTTCCTCCGATCCAGGAAAGTCCGCGGAGACGTCGGAGGCGGCGGTGGTGGTGGCGAACGACCAGCTCTTGCTCTACAGAGGATTGAAGAAGGCCAAGAAGGAGAGAGGTTGCACGGCCAAAGAGCGCATCAGCAAAATGCCTCCGTGCGCCGCCGGCAAACGCAGTTCCATATACCGCGGCGTCACGAGGCACAGGTGGACTGGTCGTTATGAAGCGCATCTTTGGGATAAGAGTACGTGGAACCAAAATCAGAATAAGAAGGGAAAGCAAGTTTACTTGGGGGCGTATGATGACGAGGAAGCAGCGGCTAGAGCATATGATCTTGCTGCTCTCAAATATTGGGGTCCTGGGACTCTCATTAACTTTCCTGTGACGGATTATACAAGAGATCTTGAAGAAATGCAGAATGTGTCAAGAGAAGAGTACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGACTAGCAAAATATCGTGGACTCTCCAGTCGATGGGATCCATCGTATGGCCGTATGTCTGGATCTGATTACTTCAATAGCATGCATTATGGTGCAGGGGATGATTCTGCAGCAGAAAGTGAATATGTAAGTGGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTCACATCAAATGGTGGGGATCTAATAAGAGTAGACATTCTGATGCTGGGACAAGATTATCAGAAGAAAAGAAACTTGGTTCTGCTGGAGATATTTGCATTGAAATTAAGCAATTGGAGCAGAAAGTTCAACCTACAGCACCTTACCAGATGCCACAGTTAGGAAGGCCCCAAAATGAGAAAAAGCATAGAAGTTCTTCAGTTTCTGCCTTAAGTATCTTGTCACAATCTGCTGCTTACAAGAGCTTGCAAGAGAAAGCGTCGAAGACACTGGAAAATATCATAGATAATGATGAGAATGAAAACAAAAATACAATCAACAAGTTGGATCATGGCAAGGCAGTTGAGAAACCATCAAATCATGACGGAGGCAATGACCGGCTTGACATTGCAACGGGAATGAGTGGAACAATGTCTCTTCAAAGAAATGTTTACCCATTGACACCATTCTTGTCTGCACCACTTTTAACAGCCTACAATACTGTTGATCCATTGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCCATGCTTCCTGCTGGCCTTTCTCATACAGCTGAGGTTACAAAGACAGAGACCAGTTCAACGTACACGATGTTTCGGCCAGAGGAATGA 1257 0.4543 MASSSSDPGKSAETSEAAVVVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLAKYRGLSSRWDPSYGRMSGSDYFNSMHYGAGDDSAAESEYVSGFCIERKIDLTSHIKWWGSNKSRHSDAGTRLSEEKKLGSAGDICIEIKQLEQKVQPTAPYQMPQLGRPQNEKKHRSSSVSALSILSQSAAYKSLQEKASKTLENIIDNDENENKNTINKLDHGKAVEKPSNHDGGNDRLDIATGMSGTMSLQRNVYPLTPFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSHTAEVTKTETSSTYTMFRPEE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01307 418 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 417 - -
Gma19g01307 418 PANTHER BNAA03G19580D PROTEIN 9 417 - -
Gma19g01307 418 Gene3D AP2/ERF domain 61 129 IPR036955 GO:0003700|GO:0006355
Gma19g01307 418 SMART rav1_2 61 133 IPR001471 GO:0003700|GO:0006355
Gma19g01307 418 ProSiteProfiles AP2/ERF domain profile. 61 127 IPR001471 GO:0003700|GO:0006355
Gma19g01307 418 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Gma19g01307 418 PRINTS Ethylene responsive element binding protein signature 109 129 IPR001471 GO:0003700|GO:0006355
Gma19g01307 418 Coils Coil 302 322 - -
Gma19g01307 418 MobiDBLite consensus disorder prediction 263 282 - -
Gma19g01307 418 Pfam AP2 domain 61 119 IPR001471 GO:0003700|GO:0006355
Gma19g01307 418 SUPERFAMILY DNA-binding domain 60 128 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01307 Gma-Chr19 42303269 42307344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01307 19 416 AP2-EREBP Transcription Factor Family AT2G41710 64.146 2.00e-168 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma19g01307 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01307 K09285 - gmx:100786651 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01307 19 42303269 42307344 Gma03g01263 03 38633167 38636803 GST