Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01305 ATGGAAGGAACAAGCAATAAGGGGTTGTTGGAATGTGGAAGGAAGTGCACTCCACCGCCGTTTTTGTTGAAGACTTATATGCTTGTGGAGGATCCGGCCACCGACGACGTCATTTCGTGGAATGCCAAAGGGACGGCGTTCGTGGTGTGGCAGCCGCCGGAGTTTGCTCGGGATCTCCTCCCAACACTCTTCAAGCACAGCAACTTCTCTAGCTTTGTACGCCAGCTCAATACTTATGTACGTGGCTTTCGTAAAGTTGCAACAAGCAGATGGGAGTTTTTCAATGACAAGTTCAAGAAAGGTGAAAGAGAACTTCTACATGAGATTCGGCGAAGGAAAGCTTGGAGCAGCAAGCAACAACCTAATGCACCAAACCAAGGCACACCCCAAGACTCTGATGAGGATCAAAGGTCCTCATCAACCTCATCATCTTTTGGTTACACTACTCTTGTGGATGAAAACAAGCGACTCAAGAAGGAGAATGGGGTGCTGAACTCTGAGCTCACAAGCATGAAAAGGAAGTGCAAGGAACTGCTTGATTTGGTTGCCACATATTCATCACATGCAAAGGAGGAGAAAAAGGATGAAAGGCCAATGTTGTTTGGAGTGAGATTAGAGGTTCAAGGAGGGAGGGAGATGAAGAGGAATAGGGCTGAGATGAGTGAAAGCACAAGCATTATGTTGTCTCAGTCATGCAAATAG 702 0.4687 MEGTSNKGLLECGRKCTPPPFLLKTYMLVEDPATDDVISWNAKGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYVRGFRKVATSRWEFFNDKFKKGERELLHEIRRRKAWSSKQQPNAPNQGTPQDSDEDQRSSSTSSSFGYTTLVDENKRLKKENGVLNSELTSMKRKCKELLDLVATYSSHAKEEKKDERPMLFGVRLEVQGGREMKRNRAEMSESTSIMLSQSCK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01305 233 Coils Coil 154 174 - -
Gma19g01305 233 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 233 IPR027725 -
Gma19g01305 233 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 5 233 - -
Gma19g01305 233 Pfam HSF-type DNA-binding 21 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01305 233 Gene3D - 13 113 IPR036388 -
Gma19g01305 233 MobiDBLite consensus disorder prediction 116 146 - -
Gma19g01305 233 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01305 233 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01305 233 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01305 233 SUPERFAMILY "Winged helix" DNA-binding domain 17 112 IPR036390 -
Gma19g01305 233 MobiDBLite consensus disorder prediction 212 233 - -
Gma19g01305 233 MobiDBLite consensus disorder prediction 112 146 - -
Gma19g01305 233 SMART hsfneu3 17 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01305 Gma-Chr19 42290933 42293767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01305 18 206 HSF AT2G41690 55.981 2.24e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma19g01305 HSF_DNA-bind 4.1e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01305 K09419 - gmx:100786140 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01305 19 42290933 42293767 Gma19g01305 19 42290933 42293767 ECH
Gma19g01305 19 42290933 42293767 Gma03g01261 03 38542661 38545563 GST